Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL670379.9-201ENST00000605428 253 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AC107952.2-201ENST00000606048 486 ntBASIC1.5□□□□□ -2.17
TPM3P06753 AL356094.1-201ENST00000624663 1212 ntBASIC1.5□□□□□ -2.17
TPM3P06753 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM3P06753 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
TPM3P06753 SNORA26.9-201ENST00000391322 122 ntBASIC1.49□□□□□ -2.17
TPM3P06753 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM3P06753 AC104651.1-201ENST00000427559 735 ntBASIC1.49□□□□□ -2.17
TPM3P06753 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM3P06753 MTCO2P20-201ENST00000437339 673 ntBASIC1.49□□□□□ -2.17
TPM3P06753 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM3P06753 AC007677.1-201ENST00000445757 515 ntBASIC1.49□□□□□ -2.17
TPM3P06753 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM3P06753 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM3P06753 AC026616.1-201ENST00000523157 525 ntBASIC1.49□□□□□ -2.17
TPM3P06753 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM3P06753 AC015720.1-201ENST00000565251 277 ntBASIC1.49□□□□□ -2.17
TPM3P06753 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM3P06753 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
TPM3P06753 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM3P06753 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.48□□□□□ -2.17
TPM3P06753 MIR26B-201ENST00000362251 77 ntBASIC1.48□□□□□ -2.17
TPM3P06753 MIR597-201ENST00000384968 97 ntBASIC1.48□□□□□ -2.17
TPM3P06753 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.48□□□□□ -2.17
TPM3P06753 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.48□□□□□ -2.17
TPM3P06753 AC245102.2-201ENST00000448956 180 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.48□□□□□ -2.17
TPM3P06753 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.48□□□□□ -2.17
TPM3P06753 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.48□□□□□ -2.17
TPM3P06753 SNORA31.3-201ENST00000516029 96 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AP000763.2-201ENST00000540641 163 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AC135279.1-201ENST00000543493 504 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.48□□□□□ -2.17
TPM3P06753 MIR4782-201ENST00000577987 79 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AC010900.2-201ENST00000604508 210 ntBASIC1.48□□□□□ -2.17
TPM3P06753 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.48□□□□□ -2.17
TPM3P06753 AC023158.2-201ENST00000614876 543 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AC021755.4-201ENST00000616620 456 ntBASIC1.48□□□□□ -2.17
TPM3P06753 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.48□□□□□ -2.17
TPM3P06753 AC231657.1-201ENST00000624313 397 ntBASIC1.48□□□□□ -2.17
TPM3P06753 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TPM3P06753 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
TPM3P06753 ZNF680P1-201ENST00000436625 1469 ntBASIC1.48□□□□□ -2.17
TPM3P06753 ZNF72P-201ENST00000425869 1908 ntBASIC1.47□□□□□ -2.17
TPM3P06753 RNU6-236P-201ENST00000363886 106 ntBASIC1.47□□□□□ -2.17
TPM3P06753 RNU6-744P-201ENST00000365557 107 ntBASIC1.47□□□□□ -2.17
TPM3P06753 RNU6-1316P-201ENST00000384242 108 ntBASIC1.47□□□□□ -2.17
TPM3P06753 SNORD14D-201ENST00000384390 87 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AC008267.5-201ENST00000424928 265 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.47□□□□□ -2.17
TPM3P06753 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.47□□□□□ -2.17
TPM3P06753 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.47□□□□□ -2.17
TPM3P06753 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.47□□□□□ -2.17
TPM3P06753 FAM92A1P2-202ENST00000504766 877 ntBASIC1.47□□□□□ -2.17
TPM3P06753 MTCYBP43-201ENST00000513621 740 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AP005660.1-201ENST00000522972 293 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.47□□□□□ -2.17
TPM3P06753 AL133153.1-201ENST00000557756 303 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AC136619.2-201ENST00000563361 631 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.47□□□□□ -2.17
TPM3P06753 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.47□□□□□ -2.17
TPM3P06753 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.47□□□□□ -2.17
TPM3P06753 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.47□□□□□ -2.17
TPM3P06753 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.47□□□□□ -2.17
TPM3P06753 AC116312.1-201ENST00000606841 314 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AC091965.5-201ENST00000624785 342 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AC097655.1-201ENST00000635075 318 ntBASIC1.47□□□□□ -2.17
TPM3P06753 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.47□□□□□ -2.17
TPM3P06753 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
TPM3P06753 RNA5SP190-201ENST00000365222 118 ntBASIC1.46□□□□□ -2.18
TPM3P06753 RNU6-611P-201ENST00000384276 104 ntBASIC1.46□□□□□ -2.18
TPM3P06753 Y_RNA.500-201ENST00000384466 111 ntBASIC1.46□□□□□ -2.18
TPM3P06753 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
TPM3P06753 AL359634.1-202ENST00000404721 284 ntBASIC1.46□□□□□ -2.18
TPM3P06753 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TPM3P06753 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 MRPS36P1-201ENST00000421291 307 ntBASIC1.46□□□□□ -2.18
TPM3P06753 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 PRELID3BP1-201ENST00000457142 540 ntBASIC1.46□□□□□ -2.18
TPM3P06753 MEMO1P3-201ENST00000459811 302 ntBASIC1.46□□□□□ -2.18
TPM3P06753 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.46□□□□□ -2.18
TPM3P06753 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 AC104417.1-201ENST00000523974 751 ntBASIC1.46□□□□□ -2.18
TPM3P06753 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.46□□□□□ -2.18
TPM3P06753 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.46□□□□□ -2.18
TPM3P06753 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC1.46□□□□□ -2.18
TPM3P06753 CLIC4P2-201ENST00000601934 717 ntBASIC1.46□□□□□ -2.18
TPM3P06753 AC012467.1-201ENST00000607740 256 ntBASIC1.46□□□□□ -2.18
TPM3P06753 AC096772.1-201ENST00000609146 564 ntBASIC1.46□□□□□ -2.18
TPM3P06753 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.46□□□□□ -2.18
TPM3P06753 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
TPM3P06753 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
TPM3P06753 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
TPM3P06753 RNU6-898P-201ENST00000365627 104 ntBASIC1.45□□□□□ -2.18
TPM3P06753 MIR518D-201ENST00000385014 87 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 158.8 ms