Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
RB1P06400 CKAP2P1-201ENST00000555477 2049 ntBASIC3□□□□□ -1.93
RB1P06400 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RB1P06400 Y_RNA.1-201ENST00000352915 104 ntBASIC3□□□□□ -1.93
RB1P06400 MIR148B-201ENST00000362252 99 ntBASIC3□□□□□ -1.93
RB1P06400 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
RB1P06400 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RB1P06400 SNORA26.7-201ENST00000391288 122 ntBASIC3□□□□□ -1.93
RB1P06400 RNU2-49P-201ENST00000410666 184 ntBASIC3□□□□□ -1.93
RB1P06400 RNU4-55P-201ENST00000410731 137 ntBASIC3□□□□□ -1.93
RB1P06400 RNA5SP111-201ENST00000411386 101 ntBASIC3□□□□□ -1.93
RB1P06400 USP9YP6-201ENST00000413550 854 ntBASIC3□□□□□ -1.93
RB1P06400 AL592148.1-201ENST00000413568 445 ntBASIC3□□□□□ -1.93
RB1P06400 MTCO3P41-201ENST00000414801 328 ntBASIC3□□□□□ -1.93
RB1P06400 OR51A5P-201ENST00000415429 942 ntBASIC3□□□□□ -1.93
RB1P06400 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3□□□□□ -1.93
RB1P06400 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3□□□□□ -1.93
RB1P06400 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3□□□□□ -1.93
RB1P06400 RPL21P2-201ENST00000440049 481 ntBASIC3□□□□□ -1.93
RB1P06400 DNAJC19P4-201ENST00000440115 345 ntBASIC3□□□□□ -1.93
RB1P06400 AC003071.1-201ENST00000451219 789 ntBASIC3□□□□□ -1.93
RB1P06400 AL162395.1-201ENST00000457882 422 ntBASIC3□□□□□ -1.93
RB1P06400 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3□□□□□ -1.93
RB1P06400 UBL5P3-201ENST00000475112 231 ntBASIC3□□□□□ -1.93
RB1P06400 EIF4EP3-201ENST00000498782 656 ntBASIC3□□□□□ -1.93
RB1P06400 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 RNU6-572P-201ENST00000516724 80 ntBASIC3□□□□□ -1.93
RB1P06400 RNA5SP503-201ENST00000517047 117 ntBASIC3□□□□□ -1.93
RB1P06400 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3□□□□□ -1.93
RB1P06400 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3□□□□□ -1.93
RB1P06400 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3□□□□□ -1.93
RB1P06400 AC020895.1-201ENST00000595362 272 ntBASIC3□□□□□ -1.93
RB1P06400 AL136363.2-201ENST00000604173 851 ntBASIC3□□□□□ -1.93
RB1P06400 AL670379.4-201ENST00000605279 254 ntBASIC3□□□□□ -1.93
RB1P06400 AC007684.1-201ENST00000609671 477 ntBASIC3□□□□□ -1.93
RB1P06400 AL359740.1-201ENST00000624340 592 ntBASIC3□□□□□ -1.93
RB1P06400 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3□□□□□ -1.93
RB1P06400 ZNF680P1-201ENST00000436625 1469 ntBASIC3□□□□□ -1.93
RB1P06400 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
RB1P06400 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
RB1P06400 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3□□□□□ -1.93
RB1P06400 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3□□□□□ -1.93
RB1P06400 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
RB1P06400 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
RB1P06400 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.99□□□□□ -1.93
RB1P06400 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
RB1P06400 SNORA51.4-201ENST00000364993 124 ntBASIC2.99□□□□□ -1.93
RB1P06400 SNORA75B-201ENST00000384053 137 ntBASIC2.99□□□□□ -1.93
RB1P06400 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
RB1P06400 SNORA40C-201ENST00000391285 128 ntBASIC2.99□□□□□ -1.93
RB1P06400 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
RB1P06400 OR6C66P-201ENST00000414917 930 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.99□□□□□ -1.93
RB1P06400 AL589823.1-201ENST00000429577 183 ntBASIC2.99□□□□□ -1.93
RB1P06400 UBBP3-201ENST00000445497 241 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC104058.1-201ENST00000448028 297 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC096725.1-201ENST00000514266 313 ntBASIC2.99□□□□□ -1.93
RB1P06400 RNU6-1183P-201ENST00000517054 60 ntBASIC2.99□□□□□ -1.93
RB1P06400 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RB1P06400 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.99□□□□□ -1.93
RB1P06400 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.99□□□□□ -1.93
RB1P06400 AC234778.2-201ENST00000566241 354 ntBASIC2.99□□□□□ -1.93
RB1P06400 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.99□□□□□ -1.93
RB1P06400 MIR548AC-201ENST00000585049 88 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC005498.1-201ENST00000592125 465 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC008739.2-201ENST00000597006 317 ntBASIC2.99□□□□□ -1.93
RB1P06400 DEFB131E-202ENST00000602581 683 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC078795.2-201ENST00000602835 1252 ntBASIC2.99□□□□□ -1.93
RB1P06400 AC008536.2-201ENST00000607284 349 ntBASIC2.99□□□□□ -1.93
RB1P06400 MIR6817-201ENST00000615588 66 ntBASIC2.99□□□□□ -1.93
RB1P06400 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.99□□□□□ -1.93
RB1P06400 AC005609.4-201ENST00000625071 447 ntBASIC2.99□□□□□ -1.93
RB1P06400 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RB1P06400 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RB1P06400 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
RB1P06400 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
RB1P06400 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RB1P06400 RNU6-1287P-201ENST00000362914 107 ntBASIC2.98□□□□□ -1.93
RB1P06400 RNU1-112P-201ENST00000364401 164 ntBASIC2.98□□□□□ -1.93
RB1P06400 SNORD21-201ENST00000383953 95 ntBASIC2.98□□□□□ -1.93
RB1P06400 RNU6-1029P-201ENST00000384109 107 ntBASIC2.98□□□□□ -1.93
RB1P06400 RNU6-1060P-201ENST00000384664 107 ntBASIC2.98□□□□□ -1.93
RB1P06400 SNORA67.4-201ENST00000384688 142 ntBASIC2.98□□□□□ -1.93
RB1P06400 SNORD116-4-201ENST00000384733 96 ntBASIC2.98□□□□□ -1.93
RB1P06400 RNU6-550P-201ENST00000391057 101 ntBASIC2.98□□□□□ -1.93
RB1P06400 RPL21P3-201ENST00000395517 478 ntBASIC2.98□□□□□ -1.93
RB1P06400 RPL21P75-201ENST00000396599 483 ntBASIC2.98□□□□□ -1.93
RB1P06400 RPL21P28-201ENST00000401418 483 ntBASIC2.98□□□□□ -1.93
RB1P06400 AL592114.1-201ENST00000403842 483 ntBASIC2.98□□□□□ -1.93
RB1P06400 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
RB1P06400 EEF1A1P40-201ENST00000412883 573 ntBASIC2.98□□□□□ -1.93
RB1P06400 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.98□□□□□ -1.93
RB1P06400 AL078601.1-201ENST00000444542 271 ntBASIC2.98□□□□□ -1.93
RB1P06400 HMGN2P10-201ENST00000448085 265 ntBASIC2.98□□□□□ -1.93
RB1P06400 AL356010.1-201ENST00000456364 102 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms