Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GTF2IP3-201ENST00000433887 494 ntBASIC1.47□□□□□ -2.17
APOEP02649 AC118469.1-201ENST00000442943 488 ntBASIC1.47□□□□□ -2.17
APOEP02649 AC009474.2-201ENST00000451383 136 ntBASIC1.47□□□□□ -2.17
APOEP02649 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.47□□□□□ -2.17
APOEP02649 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.47□□□□□ -2.17
APOEP02649 RNU7-95P-201ENST00000459222 64 ntBASIC1.47□□□□□ -2.17
APOEP02649 FO393415.2-201ENST00000480085 343 ntBASIC1.47□□□□□ -2.17
APOEP02649 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.47□□□□□ -2.17
APOEP02649 AC093809.1-201ENST00000509155 340 ntBASIC1.47□□□□□ -2.17
APOEP02649 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.47□□□□□ -2.17
APOEP02649 OR5B19P-201ENST00000531766 928 ntBASIC1.47□□□□□ -2.17
APOEP02649 NDUFA5P6-201ENST00000542110 379 ntBASIC1.47□□□□□ -2.17
APOEP02649 ARL2BPP2-201ENST00000550907 489 ntBASIC1.47□□□□□ -2.17
APOEP02649 RPS3AP4-201ENST00000555161 764 ntBASIC1.47□□□□□ -2.17
APOEP02649 AL356432.3-201ENST00000568952 465 ntBASIC1.47□□□□□ -2.17
APOEP02649 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.47□□□□□ -2.17
APOEP02649 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.47□□□□□ -2.17
APOEP02649 ELOCP5-201ENST00000604924 333 ntBASIC1.47□□□□□ -2.17
APOEP02649 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
APOEP02649 RMST_6.1-201ENST00000611980 203 ntBASIC1.47□□□□□ -2.17
APOEP02649 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
APOEP02649 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
APOEP02649 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
APOEP02649 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.46□□□□□ -2.18
APOEP02649 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
APOEP02649 RNU1-62P-201ENST00000362599 164 ntBASIC1.46□□□□□ -2.18
APOEP02649 SNORA40.19-201ENST00000390846 128 ntBASIC1.46□□□□□ -2.18
APOEP02649 MIR1302-8-201ENST00000408342 128 ntBASIC1.46□□□□□ -2.18
APOEP02649 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.46□□□□□ -2.18
APOEP02649 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
APOEP02649 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.46□□□□□ -2.18
APOEP02649 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.46□□□□□ -2.18
APOEP02649 RNY4P37-201ENST00000516225 96 ntBASIC1.46□□□□□ -2.18
APOEP02649 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
APOEP02649 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.46□□□□□ -2.18
APOEP02649 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.46□□□□□ -2.18
APOEP02649 VN1R87P-201ENST00000596706 487 ntBASIC1.46□□□□□ -2.18
APOEP02649 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
APOEP02649 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.46□□□□□ -2.18
APOEP02649 AC034229.4-201ENST00000607861 441 ntBASIC1.46□□□□□ -2.18
APOEP02649 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
APOEP02649 AC138627.2-201ENST00000624202 601 ntBASIC1.46□□□□□ -2.18
APOEP02649 AC231657.1-201ENST00000624313 397 ntBASIC1.46□□□□□ -2.18
APOEP02649 AL163152.1-201ENST00000642001 374 ntBASIC1.46□□□□□ -2.18
APOEP02649 CDC27P3-201ENST00000635418 1910 ntBASIC1.46□□□□□ -2.18
APOEP02649 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
APOEP02649 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.46□□□□□ -2.18
APOEP02649 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOEP02649 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
APOEP02649 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
APOEP02649 RNU6-609P-201ENST00000365459 107 ntBASIC1.45□□□□□ -2.18
APOEP02649 RPL21P24-201ENST00000413752 448 ntBASIC1.45□□□□□ -2.18
APOEP02649 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.45□□□□□ -2.18
APOEP02649 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.45□□□□□ -2.18
APOEP02649 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.45□□□□□ -2.18
APOEP02649 AL592045.1-201ENST00000429867 352 ntBASIC1.45□□□□□ -2.18
APOEP02649 VN1R108P-201ENST00000431580 830 ntBASIC1.45□□□□□ -2.18
APOEP02649 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.45□□□□□ -2.18
APOEP02649 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.45□□□□□ -2.18
APOEP02649 HMGB1P31-201ENST00000437242 427 ntBASIC1.45□□□□□ -2.18
APOEP02649 MTND2P29-201ENST00000438595 412 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.45□□□□□ -2.18
APOEP02649 KATNBL1P6-201ENST00000453433 915 ntBASIC1.45□□□□□ -2.18
APOEP02649 RNA5SP57-201ENST00000459463 123 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC006512.1-201ENST00000468816 291 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.45□□□□□ -2.18
APOEP02649 AC116655.1-201ENST00000508324 901 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC104417.1-201ENST00000523974 751 ntBASIC1.45□□□□□ -2.18
APOEP02649 CYCSP27-201ENST00000527643 293 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC087441.2-201ENST00000529141 262 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.45□□□□□ -2.18
APOEP02649 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.45□□□□□ -2.18
APOEP02649 AC016925.2-201ENST00000605108 242 ntBASIC1.45□□□□□ -2.18
APOEP02649 AC017037.3-201ENST00000625016 472 ntBASIC1.45□□□□□ -2.18
APOEP02649 U6.99-201ENST00000637524 83 ntBASIC1.45□□□□□ -2.18
APOEP02649 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOEP02649 AL079343.1-201ENST00000572358 1771 ntBASIC1.44□□□□□ -2.18
APOEP02649 RNU6-1280P-201ENST00000365211 107 ntBASIC1.44□□□□□ -2.18
APOEP02649 RNU1-57P-201ENST00000384491 166 ntBASIC1.44□□□□□ -2.18
APOEP02649 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
APOEP02649 AC127391.1-201ENST00000411737 98 ntBASIC1.44□□□□□ -2.18
APOEP02649 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
APOEP02649 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.44□□□□□ -2.18
APOEP02649 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.44□□□□□ -2.18
APOEP02649 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.44□□□□□ -2.18
APOEP02649 HMGB1P18-201ENST00000438801 619 ntBASIC1.44□□□□□ -2.18
APOEP02649 FTH1P25-201ENST00000447665 469 ntBASIC1.44□□□□□ -2.18
APOEP02649 AC093752.1-206ENST00000511823 336 ntBASIC1.44□□□□□ -2.18
APOEP02649 RN7SKP258-201ENST00000517151 304 ntBASIC1.44□□□□□ -2.18
APOEP02649 RNU6-667P-201ENST00000517186 102 ntBASIC1.44□□□□□ -2.18
APOEP02649 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
APOEP02649 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.44□□□□□ -2.18
APOEP02649 PSMA3P-201ENST00000555485 635 ntBASIC1.44□□□□□ -2.18
APOEP02649 AC008269.2-201ENST00000561915 1105 ntBASIC1.44□□□□□ -2.18
APOEP02649 MIR3198-2-201ENST00000577868 80 ntBASIC1.44□□□□□ -2.18
APOEP02649 MIR4421-201ENST00000578133 69 ntBASIC1.44□□□□□ -2.18
APOEP02649 SNRPGP17-201ENST00000603780 214 ntBASIC1.44□□□□□ -2.18
APOEP02649 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.44□□□□□ -2.18
APOEP02649 AP000776.1-201ENST00000530032 1663 ntBASIC1.44□□□□□ -2.18
APOEP02649 RNU6-188P-201ENST00000364207 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms