Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNA5SP445-201ENST00000515889 115 ntBASIC2.66□□□□□ -1.98
SIX3O95343 SNORA31.6-201ENST00000516241 130 ntBASIC2.66□□□□□ -1.98
SIX3O95343 ACA59.2-201ENST00000517061 156 ntBASIC2.66□□□□□ -1.98
SIX3O95343 MTCYBP20-201ENST00000524239 1129 ntBASIC2.66□□□□□ -1.98
SIX3O95343 ELOCP31-201ENST00000540463 467 ntBASIC2.66□□□□□ -1.98
SIX3O95343 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.66□□□□□ -1.98
SIX3O95343 MIR6134-201ENST00000617606 109 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.66□□□□□ -1.98
SIX3O95343 AC138649.3-201ENST00000622154 254 ntBASIC2.66□□□□□ -1.98
SIX3O95343 Z69908.1-201ENST00000622603 247 ntBASIC2.66□□□□□ -1.98
SIX3O95343 CU459211.1-201ENST00000635667 749 ntBASIC2.66□□□□□ -1.98
SIX3O95343 MIR7157-201ENST00000635801 60 ntBASIC2.66□□□□□ -1.98
SIX3O95343 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIX3O95343 AL359854.1-201ENST00000614203 1594 ntBASIC2.66□□□□□ -1.98
SIX3O95343 AC092447.7-201ENST00000422212 1621 ntBASIC2.65□□□□□ -1.98
SIX3O95343 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.99
SIX3O95343 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX3O95343 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.65□□□□□ -1.99
SIX3O95343 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX3O95343 SNORA38-201ENST00000363946 132 ntBASIC2.65□□□□□ -1.99
SIX3O95343 U8.9-201ENST00000365667 134 ntBASIC2.65□□□□□ -1.99
SIX3O95343 RNU6-456P-201ENST00000384493 107 ntBASIC2.65□□□□□ -1.99
SIX3O95343 RNU6-297P-201ENST00000384636 107 ntBASIC2.65□□□□□ -1.99
SIX3O95343 MIR34A-201ENST00000385130 110 ntBASIC2.65□□□□□ -1.99
SIX3O95343 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
SIX3O95343 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.65□□□□□ -1.99
SIX3O95343 AC104389.3-201ENST00000445629 235 ntBASIC2.65□□□□□ -1.99
SIX3O95343 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.65□□□□□ -1.99
SIX3O95343 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.65□□□□□ -1.99
SIX3O95343 AIG1P1-201ENST00000503376 148 ntBASIC2.65□□□□□ -1.99
SIX3O95343 FAM92A1P2-202ENST00000504766 877 ntBASIC2.65□□□□□ -1.99
SIX3O95343 HIGD1AP13-201ENST00000509878 289 ntBASIC2.65□□□□□ -1.99
SIX3O95343 AP001646.1-201ENST00000527936 915 ntBASIC2.65□□□□□ -1.99
SIX3O95343 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SIX3O95343 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.65□□□□□ -1.99
SIX3O95343 MIR5692A1-201ENST00000580523 69 ntBASIC2.65□□□□□ -1.99
SIX3O95343 AC008121.1-201ENST00000603244 268 ntBASIC2.65□□□□□ -1.99
SIX3O95343 AP000787.2-201ENST00000604432 568 ntBASIC2.65□□□□□ -1.99
SIX3O95343 RPL23AP88-201ENST00000605759 454 ntBASIC2.65□□□□□ -1.99
SIX3O95343 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.65□□□□□ -1.99
SIX3O95343 AL390237.1-201ENST00000404226 1415 ntBASIC2.65□□□□□ -1.99
SIX3O95343 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIX3O95343 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
SIX3O95343 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.65□□□□□ -1.99
SIX3O95343 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.64□□□□□ -1.99
SIX3O95343 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SIX3O95343 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 MIR412-201ENST00000362142 91 ntBASIC2.64□□□□□ -1.99
SIX3O95343 Y_RNA.22-201ENST00000362492 102 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-1287P-201ENST00000362914 107 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU1-112P-201ENST00000364401 164 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-61P-201ENST00000365528 109 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU1-109P-201ENST00000383960 147 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-116P-201ENST00000384042 109 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-166P-201ENST00000384371 107 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-748P-201ENST00000384648 107 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-1060P-201ENST00000384664 107 ntBASIC2.64□□□□□ -1.99
SIX3O95343 SNORA26.7-201ENST00000391288 122 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX3O95343 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX3O95343 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.64□□□□□ -1.99
SIX3O95343 MTATP6P16-201ENST00000434543 526 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.64□□□□□ -1.99
SIX3O95343 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 AP000936.2-201ENST00000447151 681 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RPL36AP48-201ENST00000485521 314 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC117522.3-201ENST00000507974 584 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.64□□□□□ -1.99
SIX3O95343 AC104806.1-201ENST00000508720 308 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 AC114781.4-201ENST00000513707 639 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX3O95343 RNA5SP112-201ENST00000515937 99 ntBASIC2.64□□□□□ -1.99
SIX3O95343 RNU6-548P-201ENST00000517083 115 ntBASIC2.64□□□□□ -1.99
SIX3O95343 SCARNA3-201ENST00000517097 143 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX3O95343 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.64□□□□□ -1.99
SIX3O95343 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.64□□□□□ -1.99
SIX3O95343 AC079600.2-201ENST00000550076 130 ntBASIC2.64□□□□□ -1.99
SIX3O95343 OR11H5P-201ENST00000554039 926 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.64□□□□□ -1.99
SIX3O95343 AL138889.2-201ENST00000603883 242 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AL021997.1-201ENST00000605757 193 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AC011890.2-201ENST00000613393 294 ntBASIC2.64□□□□□ -1.99
SIX3O95343 AL449363.1-201ENST00000617815 186 ntBASIC2.64□□□□□ -1.99
SIX3O95343 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 AC093536.2-201ENST00000565257 1406 ntBASIC2.64□□□□□ -1.99
SIX3O95343 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SIX3O95343 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX3O95343 AC138393.1-203ENST00000327086 343 ntBASIC2.63□□□□□ -1.99
SIX3O95343 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX3O95343 SNORA62.1-201ENST00000364287 154 ntBASIC2.63□□□□□ -1.99
SIX3O95343 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX3O95343 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX3O95343 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX3O95343 AL138827.1-201ENST00000402666 306 ntBASIC2.63□□□□□ -1.99
SIX3O95343 Y_RNA.623-201ENST00000411128 95 ntBASIC2.63□□□□□ -1.99
SIX3O95343 BX276092.3-201ENST00000424182 230 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms