Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL5O76039 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.8□□□□□ -1.8
CDKL5O76039 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDKL5O76039 HSPA8P4-201ENST00000511877 1920 ntBASIC3.8□□□□□ -1.8
CDKL5O76039 RNU6-715P-201ENST00000365204 103 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 RNU6-190P-201ENST00000384154 102 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 Y_RNA.482-201ENST00000384377 111 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 RNU6-14P-201ENST00000384630 106 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AL360182.1-201ENST00000397433 468 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.79□□□□□ -1.8
CDKL5O76039 RNA5SP44-201ENST00000410446 133 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 RPLP0P7-201ENST00000416050 667 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AC113618.1-201ENST00000416747 285 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.79□□□□□ -1.8
CDKL5O76039 AL669831.1-202ENST00000428504 417 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AL137792.2-201ENST00000443484 235 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.79□□□□□ -1.8
CDKL5O76039 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL5O76039 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL5O76039 ELOCP24-201ENST00000456370 334 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.79□□□□□ -1.8
CDKL5O76039 RN7SL442P-201ENST00000473804 320 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.79□□□□□ -1.8
CDKL5O76039 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.79□□□□□ -1.8
CDKL5O76039 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.79□□□□□ -1.8
CDKL5O76039 RNU2-69P-201ENST00000516061 100 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 SNORA64.4-201ENST00000516632 81 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL5O76039 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.79□□□□□ -1.8
CDKL5O76039 MIR5692C1-201ENST00000585309 91 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.79□□□□□ -1.8
CDKL5O76039 U2.17-201ENST00000611454 95 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.79□□□□□ -1.8
CDKL5O76039 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.79□□□□□ -1.8
CDKL5O76039 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDKL5O76039 MTND5P19-201ENST00000424872 1794 ntBASIC3.79□□□□□ -1.8
CDKL5O76039 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL5O76039 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL5O76039 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL5O76039 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDKL5O76039 Y_RNA.399-201ENST00000383955 105 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 RNU6-393P-201ENST00000384475 107 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AL583834.1-201ENST00000406943 343 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL5O76039 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC3.78□□□□□ -1.8
CDKL5O76039 AL159987.2-201ENST00000432754 307 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL5O76039 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL5O76039 RNU7-167P-201ENST00000459160 62 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC104472.2-201ENST00000469035 601 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 RPL7P5-201ENST00000471472 736 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC117503.1-201ENST00000472241 394 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 TRBV1-201ENST00000476502 284 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC078918.1-201ENST00000498515 228 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CDKL5O76039 AC110794.1-201ENST00000505816 425 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL5O76039 SMURF2P1-201ENST00000514992 481 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 SNORA14.1-201ENST00000516113 141 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 RNU6-1069P-201ENST00000516612 133 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL5O76039 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.78□□□□□ -1.8
CDKL5O76039 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.78□□□□□ -1.8
CDKL5O76039 OR4H12P-201ENST00000556269 907 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL5O76039 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.78□□□□□ -1.8
CDKL5O76039 CYP2C61P-201ENST00000604072 290 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC015967.1-201ENST00000619893 476 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC098657.3-201ENST00000620434 263 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 MTND5P42-201ENST00000637720 498 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 MTND5P10-201ENST00000603719 1809 ntBASIC3.78□□□□□ -1.8
CDKL5O76039 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
CDKL5O76039 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDKL5O76039 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDKL5O76039 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL5O76039 MAPK10-362ENST00000641864 4484 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 RNA5SP119-201ENST00000362715 117 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 Y_RNA.144-201ENST00000363521 113 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 RNU6-639P-201ENST00000384074 107 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 Y_RNA.459-201ENST00000384251 102 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 RNU6-310P-201ENST00000384655 107 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDKL5O76039 RPL7P10-201ENST00000417407 739 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL5O76039 MIR2053-201ENST00000459295 91 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AC008155.2-201ENST00000464337 397 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AC087884.1-201ENST00000469738 328 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 PTP4A1P4-201ENST00000512479 322 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL5O76039 SNORA31.22-201ENST00000517204 135 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.77□□□□□ -1.81
CDKL5O76039 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.77□□□□□ -1.81
CDKL5O76039 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.77□□□□□ -1.81
CDKL5O76039 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.77□□□□□ -1.81
CDKL5O76039 MTCO3P23-201ENST00000561363 289 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 MIR4429-201ENST00000580105 73 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 MIR3671-201ENST00000580455 88 ntBASIC3.77□□□□□ -1.81
CDKL5O76039 MIR5690-201ENST00000583739 73 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms