Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AL583843.1-201ENST00000456070 346 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 RPS3P1-201ENST00000456781 192 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK1BO75841 HMGB1P35-201ENST00000503360 598 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1BO75841 RNA5SP148-201ENST00000516527 94 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 RNA5SP137-201ENST00000516833 135 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 SNORA48.11-201ENST00000517015 89 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 RNU6-1003P-201ENST00000517099 105 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.62□□□□□ -2.15
UPK1BO75841 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1BO75841 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.62□□□□□ -2.15
UPK1BO75841 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.62□□□□□ -2.15
UPK1BO75841 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1BO75841 MIR1273C-201ENST00000578669 77 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.62□□□□□ -2.15
UPK1BO75841 AC087045.1-201ENST00000605856 382 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 AC093788.1-201ENST00000609356 927 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 AC092106.3-201ENST00000611308 722 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 MIR6817-201ENST00000615588 66 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 SDR42E1P4-201ENST00000620894 481 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 FRG1KP-201ENST00000623592 341 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK1BO75841 AL137790.1-201ENST00000634283 177 ntBASIC1.62□□□□□ -2.15
UPK1BO75841 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.62□□□□□ -2.15
UPK1BO75841 RBBP8P1-201ENST00000449447 1844 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AC006020.1-201ENST00000420179 1854 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 RNY4P24-201ENST00000362735 96 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 SNORD46.1-201ENST00000364139 104 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
UPK1BO75841 RNU6-253P-201ENST00000384730 105 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 SNORA11.4-201ENST00000408823 129 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 RNA5SP450-201ENST00000411206 102 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 SNORD56-201ENST00000413522 71 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AC009518.2-201ENST00000418056 731 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AC138623.1-201ENST00000418060 216 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK1BO75841 AL353777.1-201ENST00000425552 326 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1BO75841 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1BO75841 snoU109.2-201ENST00000459316 135 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 MTND3P3-201ENST00000505004 126 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AC119751.4-201ENST00000507498 357 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AC034114.1-201ENST00000520293 285 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1BO75841 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1BO75841 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.61□□□□□ -2.15
UPK1BO75841 AC092325.1-201ENST00000566449 554 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 MTCYBP33-201ENST00000575007 1130 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 MIR3618-201ENST00000580330 88 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 SNRPGP19-201ENST00000603826 189 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AL031281.1-201ENST00000604049 488 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AL139022.2-201ENST00000606934 443 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 RNU6-91P-201ENST00000607774 107 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AL391834.2-201ENST00000609982 546 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 Y_RNA.783-201ENST00000613546 102 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UPK1BO75841 ZNF876P-202ENST00000398732 1485 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 AP006437.1-201ENST00000641440 3685 ntBASIC1.61□□□□□ -2.15
UPK1BO75841 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.6□□□□□ -2.15
UPK1BO75841 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
UPK1BO75841 SNORD3E-201ENST00000362899 217 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 SNORD114-19-201ENST00000363072 75 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AL512604.1-201ENST00000404812 257 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 RNU2-20P-201ENST00000410425 191 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 RPS15AP12-201ENST00000419498 388 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AL445685.2-201ENST00000422551 342 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 HIGD1AP2-201ENST00000446367 280 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1BO75841 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.6□□□□□ -2.15
UPK1BO75841 SSXP1-201ENST00000453640 473 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 RPL23AP3-201ENST00000453844 468 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC117503.1-201ENST00000472241 394 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC080014.1-201ENST00000496877 1201 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1BO75841 RNU6-201P-201ENST00000517100 61 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC022616.6-201ENST00000520479 119 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 MTND4P33-201ENST00000556706 766 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC136619.2-201ENST00000563361 631 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC093249.1-201ENST00000567049 203 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC112187.2-201ENST00000604345 283 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AL160281.1-201ENST00000605307 311 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC144521.1-201ENST00000607148 956 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 MIR92B-201ENST00000607575 96 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 MIR6798-201ENST00000612887 67 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC008121.3-201ENST00000618726 433 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC024940.5-201ENST00000622889 474 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AL356266.1-201ENST00000623311 483 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 AC091953.2-201ENST00000623979 160 ntBASIC1.6□□□□□ -2.15
UPK1BO75841 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.6□□□□□ -2.15
UPK1BO75841 AC010149.2-201ENST00000637608 315 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 221.1 ms