Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC098831.1-201ENST00000440661 216 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SSX4O60224 AL583843.1-201ENST00000456070 346 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AL590639.1-201ENST00000456484 337 ntBASIC2.79□□□□□ -1.96
SSX4O60224 SNRPFP3-201ENST00000457792 225 ntBASIC2.79□□□□□ -1.96
SSX4O60224 RPL27AP5-201ENST00000469428 449 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC026801.1-201ENST00000497178 464 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.79□□□□□ -1.96
SSX4O60224 RNU6-1178P-201ENST00000516674 107 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 AC007536.1-201ENST00000533382 349 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AL512310.1-201ENST00000548639 172 ntBASIC2.79□□□□□ -1.96
SSX4O60224 HIF1AP1-201ENST00000553642 175 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.79□□□□□ -1.96
SSX4O60224 AC025678.1-201ENST00000567861 338 ntBASIC2.79□□□□□ -1.96
SSX4O60224 LARP7P3-201ENST00000579888 337 ntBASIC2.79□□□□□ -1.96
SSX4O60224 MIR5692A1-201ENST00000580523 69 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AL137843.1-201ENST00000605078 385 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC073657.2-201ENST00000605661 303 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.79□□□□□ -1.96
SSX4O60224 U6.42-201ENST00000618440 107 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AL356321.1-201ENST00000621360 228 ntBASIC2.79□□□□□ -1.96
SSX4O60224 AC002064.3-201ENST00000623448 346 ntBASIC2.79□□□□□ -1.96
SSX4O60224 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SSX4O60224 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSX4O60224 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX4O60224 MIR412-201ENST00000362142 91 ntBASIC2.78□□□□□ -1.96
SSX4O60224 Y_RNA.6-201ENST00000362350 114 ntBASIC2.78□□□□□ -1.96
SSX4O60224 RNU6-715P-201ENST00000365204 103 ntBASIC2.78□□□□□ -1.96
SSX4O60224 U8.9-201ENST00000365667 134 ntBASIC2.78□□□□□ -1.96
SSX4O60224 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 SNORA69-201ENST00000383895 132 ntBASIC2.78□□□□□ -1.96
SSX4O60224 RNU6-483P-201ENST00000384088 108 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AL590004.2-201ENST00000404787 371 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AL645937.1-202ENST00000421799 937 ntBASIC2.78□□□□□ -1.96
SSX4O60224 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.78□□□□□ -1.96
SSX4O60224 RPL23AP58-201ENST00000440453 469 ntBASIC2.78□□□□□ -1.96
SSX4O60224 RPS12P18-201ENST00000442381 270 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.78□□□□□ -1.96
SSX4O60224 HMGN2P10-201ENST00000448085 265 ntBASIC2.78□□□□□ -1.96
SSX4O60224 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 RNU6-261P-201ENST00000459506 102 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC109925.1-201ENST00000478069 331 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC006445.1-201ENST00000491925 405 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 AC008716.1-201ENST00000511084 513 ntBASIC2.78□□□□□ -1.96
SSX4O60224 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.78□□□□□ -1.96
SSX4O60224 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.78□□□□□ -1.96
SSX4O60224 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 AC022080.3-201ENST00000544433 482 ntBASIC2.78□□□□□ -1.96
SSX4O60224 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 ZNF519P2-201ENST00000557032 169 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC021739.1-201ENST00000559631 174 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC025281.1-201ENST00000567026 265 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX4O60224 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX4O60224 uc_338.1-201ENST00000612113 180 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC010338.1-201ENST00000621823 717 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.78□□□□□ -1.96
SSX4O60224 AC068137.3-201ENST00000639191 341 ntBASIC2.78□□□□□ -1.96
SSX4O60224 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX4O60224 AC073869.6-201ENST00000640656 341 ntBASIC2.78□□□□□ -1.96
SSX4O60224 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX4O60224 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.78□□□□□ -1.96
SSX4O60224 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.78□□□□□ -1.97
SSX4O60224 MTND4P14-201ENST00000435799 1354 ntBASIC2.77□□□□□ -1.97
SSX4O60224 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSX4O60224 RNU6-1127P-201ENST00000384580 107 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AL138885.1-201ENST00000405921 675 ntBASIC2.77□□□□□ -1.97
SSX4O60224 Y_RNA.623-201ENST00000411128 95 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AL592148.1-201ENST00000413568 445 ntBASIC2.77□□□□□ -1.97
SSX4O60224 ATG3P1-201ENST00000419507 911 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.77□□□□□ -1.97
SSX4O60224 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.77□□□□□ -1.97
SSX4O60224 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.77□□□□□ -1.97
SSX4O60224 AL669831.1-202ENST00000428504 417 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.77□□□□□ -1.97
SSX4O60224 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.77□□□□□ -1.97
SSX4O60224 GTF2IP13-201ENST00000438487 386 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.77□□□□□ -1.97
SSX4O60224 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
SSX4O60224 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.77□□□□□ -1.97
SSX4O60224 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.77□□□□□ -1.97
SSX4O60224 RPS29P12-201ENST00000460178 152 ntBASIC2.77□□□□□ -1.97
SSX4O60224 RN7SL863P-201ENST00000462370 296 ntBASIC2.77□□□□□ -1.97
SSX4O60224 FAM92A1P2-202ENST00000504766 877 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AC104136.1-201ENST00000512969 394 ntBASIC2.77□□□□□ -1.97
SSX4O60224 RN7SKP43-201ENST00000516173 320 ntBASIC2.77□□□□□ -1.97
SSX4O60224 RNU6-835P-201ENST00000516974 104 ntBASIC2.77□□□□□ -1.97
SSX4O60224 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.77□□□□□ -1.97
SSX4O60224 SUB1P1-201ENST00000524415 382 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms