Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RPS15AP34-201ENST00000487776 387 ntBASIC3.13□□□□□ -1.91
LDB2O43679 HIGD1AP13-201ENST00000509878 289 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC104136.1-201ENST00000512969 394 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RNU2-69P-201ENST00000516061 100 ntBASIC3.13□□□□□ -1.91
LDB2O43679 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB2O43679 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB2O43679 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB2O43679 SCOCP1-201ENST00000554676 349 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC005668.1-201ENST00000571142 476 ntBASIC3.13□□□□□ -1.91
LDB2O43679 RPS3AP23-202ENST00000574601 686 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC005498.1-201ENST00000592125 465 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AL161798.1-201ENST00000604630 131 ntBASIC3.13□□□□□ -1.91
LDB2O43679 CTHRC1P1-201ENST00000605383 469 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC087045.1-201ENST00000605856 382 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC103705.1-201ENST00000619013 241 ntBASIC3.13□□□□□ -1.91
LDB2O43679 TPTEP1-208ENST00000636884 213 ntBASIC3.13□□□□□ -1.91
LDB2O43679 AC112487.2-201ENST00000637950 304 ntBASIC3.13□□□□□ -1.91
LDB2O43679 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LDB2O43679 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LDB2O43679 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AL355596.1-201ENST00000565399 3996 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB2O43679 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LDB2O43679 RNU6-694P-201ENST00000364071 147 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RNU6-512P-201ENST00000364438 103 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RNA5SP219-201ENST00000390940 113 ntBASIC3.12□□□□□ -1.91
LDB2O43679 EIF4E2P1-201ENST00000393781 255 ntBASIC3.12□□□□□ -1.91
LDB2O43679 NDUFB4P4-201ENST00000404822 243 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RNU2-33P-201ENST00000410344 192 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RPL7P10-201ENST00000417407 739 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB2O43679 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB2O43679 AL592045.1-201ENST00000429867 352 ntBASIC3.12□□□□□ -1.91
LDB2O43679 HMGN2P20-201ENST00000437531 273 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB2O43679 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.12□□□□□ -1.91
LDB2O43679 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB2O43679 RNU7-167P-201ENST00000459160 62 ntBASIC3.12□□□□□ -1.91
LDB2O43679 DYNLL1P5-201ENST00000467158 270 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AL160314.1-201ENST00000490836 438 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC103851.1-201ENST00000506833 274 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB2O43679 PHBP14-201ENST00000512887 367 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RNU1-61P-201ENST00000516107 151 ntBASIC3.12□□□□□ -1.91
LDB2O43679 RNU6-143P-201ENST00000516942 93 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC105029.1-201ENST00000520250 669 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC068657.1-201ENST00000520807 306 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC093331.1-201ENST00000521474 169 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AP001804.3-201ENST00000525146 880 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC090115.3-201ENST00000553218 849 ntBASIC3.12□□□□□ -1.91
LDB2O43679 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC243960.4-201ENST00000600532 288 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.12□□□□□ -1.91
LDB2O43679 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDB2O43679 AL132765.2-201ENST00000610812 351 ntBASIC3.12□□□□□ -1.91
LDB2O43679 AC022140.2-201ENST00000623500 188 ntBASIC3.12□□□□□ -1.91
LDB2O43679 Z99571.1-201ENST00000636677 394 ntBASIC3.12□□□□□ -1.91
LDB2O43679 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.12□□□□□ -1.91
LDB2O43679 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
LDB2O43679 AC002546.1-201ENST00000588041 2504 ntBASIC3.12□□□□□ -1.91
LDB2O43679 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB2O43679 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LDB2O43679 MIR148B-201ENST00000362252 99 ntBASIC3.11□□□□□ -1.91
LDB2O43679 RNA5SP374-201ENST00000362939 125 ntBASIC3.11□□□□□ -1.91
LDB2O43679 RNU4-73P-201ENST00000363164 141 ntBASIC3.11□□□□□ -1.91
LDB2O43679 SNORD113-7-201ENST00000363762 77 ntBASIC3.11□□□□□ -1.91
LDB2O43679 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LDB2O43679 SNORA48.5-201ENST00000391143 135 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AL122016.1-201ENST00000403365 367 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB2O43679 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.11□□□□□ -1.91
LDB2O43679 NDUFA5P4-201ENST00000436704 385 ntBASIC3.11□□□□□ -1.91
LDB2O43679 RPS24P13-201ENST00000442520 397 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC009237.8-201ENST00000445492 379 ntBASIC3.11□□□□□ -1.91
LDB2O43679 PPP1R2P5-201ENST00000457256 603 ntBASIC3.11□□□□□ -1.91
LDB2O43679 RPL21P41-201ENST00000459863 264 ntBASIC3.11□□□□□ -1.91
LDB2O43679 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB2O43679 TRBVA-201ENST00000498804 316 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB2O43679 SUMO2P6-201ENST00000505273 288 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 RNU6-864P-201ENST00000516256 108 ntBASIC3.11□□□□□ -1.91
LDB2O43679 RNA5SP291-201ENST00000517222 105 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC090136.1-201ENST00000520009 240 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 AP000763.2-201ENST00000540641 163 ntBASIC3.11□□□□□ -1.91
LDB2O43679 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.11□□□□□ -1.91
LDB2O43679 AC026464.5-201ENST00000562497 722 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.11□□□□□ -1.91
LDB2O43679 MIR4474-201ENST00000579189 78 ntBASIC3.11□□□□□ -1.91
LDB2O43679 MIR4719-201ENST00000585233 84 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC011471.1-201ENST00000585766 187 ntBASIC3.11□□□□□ -1.91
LDB2O43679 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.11□□□□□ -1.91
LDB2O43679 Z82243.1-201ENST00000609432 473 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AC022418.1-201ENST00000624118 445 ntBASIC3.11□□□□□ -1.91
LDB2O43679 AL512643.1-201ENST00000635735 524 ntBASIC3.11□□□□□ -1.91
LDB2O43679 MTND1P37-201ENST00000636562 264 ntBASIC3.11□□□□□ -1.91
LDB2O43679 MIR622-201ENST00000638396 96 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms