Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.48□□□□□ -1.85
PHGDHO43175 AC008526.1-201ENST00000509149 338 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.48□□□□□ -1.85
PHGDHO43175 Y_RNA.687-201ENST00000516558 91 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 AP005597.4-201ENST00000526762 229 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.48□□□□□ -1.85
PHGDHO43175 AC008121.1-201ENST00000603244 268 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 AL161629.2-201ENST00000615347 275 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 ATP5A1P2-202ENST00000616464 443 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 U6.98-201ENST00000637157 84 ntBASIC3.48□□□□□ -1.85
PHGDHO43175 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
PHGDHO43175 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
PHGDHO43175 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PHGDHO43175 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.47□□□□□ -1.85
PHGDHO43175 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PHGDHO43175 ADAM3A-203ENST00000461344 2157 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PHGDHO43175 RNU6-562P-201ENST00000362731 107 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 SNORD116-11-201ENST00000383882 92 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 RNU6-72P-201ENST00000384285 79 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PHGDHO43175 AL096701.2-201ENST00000416920 238 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AC093151.1-201ENST00000427711 313 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.47□□□□□ -1.85
PHGDHO43175 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.47□□□□□ -1.85
PHGDHO43175 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.47□□□□□ -1.85
PHGDHO43175 MTCO1P29-201ENST00000496868 288 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AC110768.1-201ENST00000509222 400 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.47□□□□□ -1.85
PHGDHO43175 Y_RNA.691-201ENST00000516611 103 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 MIR2276-201ENST00000516886 89 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 RNA5SP454-201ENST00000517231 127 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 COPS8P3-201ENST00000526024 482 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AC026371.1-201ENST00000551867 419 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.47□□□□□ -1.85
PHGDHO43175 MIR4790-201ENST00000577799 79 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AL451007.1-201ENST00000595491 289 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AC024220.1-201ENST00000603675 484 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 SCARNA4-202ENST00000625402 129 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 AC110491.1-201ENST00000562191 2010 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
PHGDHO43175 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PHGDHO43175 AC233263.6-201ENST00000631132 1963 ntBASIC3.47□□□□□ -1.85
PHGDHO43175 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PHGDHO43175 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.47□□□□□ -1.85
PHGDHO43175 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PHGDHO43175 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PHGDHO43175 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PHGDHO43175 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PHGDHO43175 RNU4-73P-201ENST00000363164 141 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PHGDHO43175 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.46□□□□□ -1.86
PHGDHO43175 MIR591-201ENST00000385290 95 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 U3.37-201ENST00000408528 213 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 RNU6-55P-201ENST00000411092 107 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 RNU6-954P-201ENST00000411355 107 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 ATP5A1P2-201ENST00000412323 255 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.46□□□□□ -1.86
PHGDHO43175 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.46□□□□□ -1.86
PHGDHO43175 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.46□□□□□ -1.86
PHGDHO43175 AL159987.2-201ENST00000432754 307 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.46□□□□□ -1.86
PHGDHO43175 AL031274.1-201ENST00000450334 232 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.46□□□□□ -1.86
PHGDHO43175 RNU7-23P-201ENST00000459465 62 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AP002884.2-201ENST00000471647 395 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 RPL39P5-202ENST00000512505 151 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.46□□□□□ -1.86
PHGDHO43175 AP005639.2-201ENST00000527592 928 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.46□□□□□ -1.86
PHGDHO43175 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
PHGDHO43175 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 MIR5047-201ENST00000579212 100 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.46□□□□□ -1.86
PHGDHO43175 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.46□□□□□ -1.86
PHGDHO43175 AL132765.2-201ENST00000610812 351 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AC009233.1-201ENST00000616477 371 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AL355365.1-201ENST00000616480 294 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 XIST_intron.1-201ENST00000619444 68 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 AL513302.2-201ENST00000562313 1842 ntBASIC3.46□□□□□ -1.86
PHGDHO43175 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PHGDHO43175 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.46□□□□□ -1.86
PHGDHO43175 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
PHGDHO43175 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.46□□□□□ -1.86
PHGDHO43175 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.46□□□□□ -1.86
PHGDHO43175 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.45□□□□□ -1.86
PHGDHO43175 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.45□□□□□ -1.86
PHGDHO43175 ZNF519P1-201ENST00000449011 1626 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC010680.1-201ENST00000590024 3590 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PHGDHO43175 Y_RNA.135-201ENST00000363439 95 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 MIR518D-201ENST00000385014 87 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 MIR548F5-201ENST00000408421 86 ntBASIC3.45□□□□□ -1.86
PHGDHO43175 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.45□□□□□ -1.86
PHGDHO43175 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.45□□□□□ -1.86
PHGDHO43175 AL035423.1-201ENST00000420331 213 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms