Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM1O15116 IGHVIII-44-202ENST00000636235 289 ntBASIC1.93□□□□□ -2.1
LSM1O15116 AL445984.1-201ENST00000637834 659 ntBASIC1.93□□□□□ -2.1
LSM1O15116 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LSM1O15116 MTND4P9-201ENST00000507819 1346 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC008555.8-201ENST00000623602 2168 ntBASIC1.92□□□□□ -2.1
LSM1O15116 RNU4-82P-201ENST00000362443 140 ntBASIC1.92□□□□□ -2.1
LSM1O15116 RNU6-1159P-201ENST00000362933 107 ntBASIC1.92□□□□□ -2.1
LSM1O15116 RNY3P13-201ENST00000365542 102 ntBASIC1.92□□□□□ -2.1
LSM1O15116 RNU5E-6P-201ENST00000365574 115 ntBASIC1.92□□□□□ -2.1
LSM1O15116 MIR301A-201ENST00000385261 86 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL512604.1-201ENST00000404812 257 ntBASIC1.92□□□□□ -2.1
LSM1O15116 MTCO2P21-201ENST00000419780 677 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL160275.3-201ENST00000423876 471 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.92□□□□□ -2.1
LSM1O15116 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.92□□□□□ -2.1
LSM1O15116 MTND1P32-201ENST00000433043 938 ntBASIC1.92□□□□□ -2.1
LSM1O15116 MTND4P25-201ENST00000441039 533 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.92□□□□□ -2.1
LSM1O15116 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM1O15116 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM1O15116 AC003071.1-201ENST00000451219 789 ntBASIC1.92□□□□□ -2.1
LSM1O15116 MTCO1P42-201ENST00000457379 726 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL049829.1-201ENST00000465411 156 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.92□□□□□ -2.1
LSM1O15116 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.92□□□□□ -2.1
LSM1O15116 RNU6-201P-201ENST00000517100 61 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC107953.1-201ENST00000522216 297 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC023050.2-201ENST00000544968 387 ntBASIC1.92□□□□□ -2.1
LSM1O15116 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.92□□□□□ -2.1
LSM1O15116 AC136619.2-201ENST00000563361 631 ntBASIC1.92□□□□□ -2.1
LSM1O15116 MIR5089-201ENST00000580047 84 ntBASIC1.92□□□□□ -2.1
LSM1O15116 MIR4435-1-201ENST00000582552 80 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC112187.2-201ENST00000604345 283 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC107952.2-201ENST00000606048 486 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL139022.2-201ENST00000606934 443 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC144521.1-201ENST00000607148 956 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC092953.2-201ENST00000608000 699 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AL139418.1-201ENST00000613613 177 ntBASIC1.92□□□□□ -2.1
LSM1O15116 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.92□□□□□ -2.1
LSM1O15116 AL512643.1-201ENST00000635735 524 ntBASIC1.92□□□□□ -2.1
LSM1O15116 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.91□□□□□ -2.1
LSM1O15116 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LSM1O15116 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.91□□□□□ -2.1
LSM1O15116 SNORA25B-201ENST00000365507 128 ntBASIC1.91□□□□□ -2.1
LSM1O15116 RNU6-906P-201ENST00000384700 70 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AL591034.2-201ENST00000402839 359 ntBASIC1.91□□□□□ -2.1
LSM1O15116 FTH1P15-201ENST00000406984 280 ntBASIC1.91□□□□□ -2.1
LSM1O15116 ELOCP17-201ENST00000414751 326 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM1O15116 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.91□□□□□ -2.1
LSM1O15116 BTF3P15-201ENST00000455606 336 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.91□□□□□ -2.1
LSM1O15116 CKS1BP2-201ENST00000497342 240 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM1O15116 AC123904.2-201ENST00000548059 300 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
LSM1O15116 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.91□□□□□ -2.1
LSM1O15116 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.91□□□□□ -2.1
LSM1O15116 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.91□□□□□ -2.1
LSM1O15116 AF131215.7-201ENST00000602443 707 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AC174048.1-201ENST00000603389 144 ntBASIC1.91□□□□□ -2.1
LSM1O15116 NDUFA8P1-201ENST00000605525 367 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AC022893.3-201ENST00000607665 437 ntBASIC1.91□□□□□ -2.1
LSM1O15116 AC009974.1-201ENST00000608881 455 ntBASIC1.91□□□□□ -2.1
LSM1O15116 Y_RNA.783-201ENST00000613546 102 ntBASIC1.91□□□□□ -2.1
LSM1O15116 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
LSM1O15116 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.9□□□□□ -2.1
LSM1O15116 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
LSM1O15116 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
LSM1O15116 AL133475.1-201ENST00000404414 305 ntBASIC1.9□□□□□ -2.11
LSM1O15116 MIR1302-8-201ENST00000408342 128 ntBASIC1.9□□□□□ -2.11
LSM1O15116 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
LSM1O15116 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM1O15116 AL353777.1-201ENST00000425552 326 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM1O15116 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM1O15116 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM1O15116 FABP5P13-201ENST00000452144 328 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM1O15116 AC140059.1-201ENST00000489238 361 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AC020699.1-201ENST00000505161 445 ntBASIC1.9□□□□□ -2.11
LSM1O15116 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LSM1O15116 AC091965.2-201ENST00000512324 613 ntBASIC1.9□□□□□ -2.11
LSM1O15116 RNU6-1092P-201ENST00000516955 87 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AC034114.1-201ENST00000520293 285 ntBASIC1.9□□□□□ -2.11
LSM1O15116 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM1O15116 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.9□□□□□ -2.11
LSM1O15116 NDUFA5P6-201ENST00000542110 379 ntBASIC1.9□□□□□ -2.11
LSM1O15116 PSMA3P-201ENST00000555485 635 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AL157871.3-201ENST00000557231 293 ntBASIC1.9□□□□□ -2.11
LSM1O15116 MIR1273C-201ENST00000578669 77 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AC010928.2-201ENST00000588017 287 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AP000860.1-201ENST00000605250 559 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.9□□□□□ -2.11
LSM1O15116 MIR6852-201ENST00000621699 66 ntBASIC1.9□□□□□ -2.11
LSM1O15116 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.9□□□□□ -2.11
LSM1O15116 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms