Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 RPL23AP45-201ENST00000476406 468 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AC126182.1-201ENST00000478134 357 ntBASIC2.41□□□□□ -2.02
CDX4O14627 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 AC109927.2-201ENST00000506416 303 ntBASIC2.41□□□□□ -2.02
CDX4O14627 RNA5SP281-201ENST00000516504 135 ntBASIC2.41□□□□□ -2.02
CDX4O14627 RNU6-56P-201ENST00000516986 93 ntBASIC2.41□□□□□ -2.02
CDX4O14627 FAM92A1P1-201ENST00000528023 890 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.41□□□□□ -2.02
CDX4O14627 RPS3AP4-201ENST00000555161 764 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.41□□□□□ -2.02
CDX4O14627 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 MIR4801-201ENST00000582704 82 ntBASIC2.41□□□□□ -2.02
CDX4O14627 NRBF2P1-201ENST00000587407 859 ntBASIC2.41□□□□□ -2.02
CDX4O14627 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.41□□□□□ -2.02
CDX4O14627 AC010620.2-201ENST00000600135 313 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AP000860.1-201ENST00000605250 559 ntBASIC2.41□□□□□ -2.02
CDX4O14627 MIR98-201ENST00000606724 119 ntBASIC2.41□□□□□ -2.02
CDX4O14627 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.41□□□□□ -2.02
CDX4O14627 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDX4O14627 AC090617.7-201ENST00000623952 126 ntBASIC2.41□□□□□ -2.02
CDX4O14627 CR381653.2-201ENST00000624041 768 ntBASIC2.41□□□□□ -2.02
CDX4O14627 MTND1P37-201ENST00000636562 264 ntBASIC2.41□□□□□ -2.02
CDX4O14627 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.41□□□□□ -2.02
CDX4O14627 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
CDX4O14627 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.4□□□□□ -2.02
CDX4O14627 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDX4O14627 HSPE1P11-201ENST00000339579 310 ntBASIC2.4□□□□□ -2.03
CDX4O14627 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CDX4O14627 RNA5SP139-201ENST00000364340 117 ntBASIC2.4□□□□□ -2.03
CDX4O14627 Y_RNA.372-201ENST00000365599 102 ntBASIC2.4□□□□□ -2.03
CDX4O14627 CALM2P3-201ENST00000400429 449 ntBASIC2.4□□□□□ -2.03
CDX4O14627 NDUFS5P1-201ENST00000405668 289 ntBASIC2.4□□□□□ -2.03
CDX4O14627 BTF3P7-201ENST00000407097 488 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.4□□□□□ -2.03
CDX4O14627 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.4□□□□□ -2.03
CDX4O14627 AC092047.1-201ENST00000424997 240 ntBASIC2.4□□□□□ -2.03
CDX4O14627 ZNF863P-201ENST00000426746 417 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 UBE2V1P8-201ENST00000437166 265 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 BNIP3P2-201ENST00000441221 577 ntBASIC2.4□□□□□ -2.03
CDX4O14627 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 USP9YP15-201ENST00000442391 422 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
CDX4O14627 RN7SL75P-201ENST00000461926 281 ntBASIC2.4□□□□□ -2.03
CDX4O14627 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
CDX4O14627 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 RNU7-51P-201ENST00000516560 62 ntBASIC2.4□□□□□ -2.03
CDX4O14627 Vault.3-201ENST00000516676 95 ntBASIC2.4□□□□□ -2.03
CDX4O14627 RNU6-1220P-201ENST00000517126 108 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.4□□□□□ -2.03
CDX4O14627 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC2.4□□□□□ -2.03
CDX4O14627 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.4□□□□□ -2.03
CDX4O14627 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.4□□□□□ -2.03
CDX4O14627 MIR3167-201ENST00000579623 85 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX4O14627 AC245014.2-201ENST00000603689 287 ntBASIC2.4□□□□□ -2.03
CDX4O14627 RBM11P1-201ENST00000604951 799 ntBASIC2.4□□□□□ -2.03
CDX4O14627 AC246785.4-201ENST00000605374 287 ntBASIC2.4□□□□□ -2.03
CDX4O14627 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX4O14627 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX4O14627 MTND5P6-201ENST00000422338 1798 ntBASIC2.4□□□□□ -2.03
CDX4O14627 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.4□□□□□ -2.03
CDX4O14627 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX4O14627 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CDX4O14627 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX4O14627 MIR148B-201ENST00000362252 99 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNU6-181P-201ENST00000363225 107 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNU6-511P-201ENST00000363496 107 ntBASIC2.39□□□□□ -2.03
CDX4O14627 Y_RNA.245-201ENST00000364493 95 ntBASIC2.39□□□□□ -2.03
CDX4O14627 Y_RNA.409-201ENST00000383990 98 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNU6-780P-201ENST00000391030 104 ntBASIC2.39□□□□□ -2.03
CDX4O14627 SNORD115-47-201ENST00000391226 86 ntBASIC2.39□□□□□ -2.03
CDX4O14627 MTCO3P40-201ENST00000392516 676 ntBASIC2.39□□□□□ -2.03
CDX4O14627 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDX4O14627 RNU4-55P-201ENST00000410731 137 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RN7SKP123-201ENST00000410732 291 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.39□□□□□ -2.03
CDX4O14627 MTND3P17-201ENST00000416968 344 ntBASIC2.39□□□□□ -2.03
CDX4O14627 ELOCP4-201ENST00000420090 333 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX4O14627 ISCA1P1-201ENST00000426679 387 ntBASIC2.39□□□□□ -2.03
CDX4O14627 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.39□□□□□ -2.03
CDX4O14627 MTCO2P11-201ENST00000431069 680 ntBASIC2.39□□□□□ -2.03
CDX4O14627 MRPS10P2-201ENST00000431226 381 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AL596276.1-201ENST00000434465 418 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AL136380.1-201ENST00000447970 162 ntBASIC2.39□□□□□ -2.03
CDX4O14627 PSPHP1-201ENST00000450062 261 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNU6-953P-201ENST00000459154 107 ntBASIC2.39□□□□□ -2.03
CDX4O14627 AL121769.1-201ENST00000469473 401 ntBASIC2.39□□□□□ -2.03
CDX4O14627 CKS1BP2-201ENST00000497342 240 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNA5SP458-201ENST00000516188 119 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNU6-445P-201ENST00000516949 107 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNA5SP337-201ENST00000517007 109 ntBASIC2.39□□□□□ -2.03
CDX4O14627 RNA5SP290-201ENST00000517133 127 ntBASIC2.39□□□□□ -2.03
CDX4O14627 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.39□□□□□ -2.03
CDX4O14627 AC021269.2-201ENST00000532318 330 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms