Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TRIM38O00635 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM38O00635 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM38O00635 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.84
TRIM38O00635 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
TRIM38O00635 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM38O00635 AL049781.1-201ENST00000623195 3585 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
TRIM38O00635 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM38O00635 RNU6-288P-201ENST00000363690 104 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 SNORD115-7-201ENST00000365306 82 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 RNU6-1297P-201ENST00000384415 104 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 RNA5SP424-201ENST00000390988 115 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 RNY4P36-201ENST00000391116 96 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM38O00635 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM38O00635 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM38O00635 MTCO2P27-201ENST00000420740 428 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AL158156.1-201ENST00000422509 473 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 MTCYBP9-201ENST00000431021 303 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM38O00635 RPS3AP52-201ENST00000435639 297 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM38O00635 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM38O00635 RPL32P28-201ENST00000443577 397 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 FABP5P13-201ENST00000452144 328 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM38O00635 RPL23AP14-201ENST00000468281 468 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 RN7SL330P-201ENST00000469709 307 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 SNORA31.1-201ENST00000515993 133 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 SNORA31.5-201ENST00000516190 133 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 RNU6-143P-201ENST00000516942 93 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 RNA5SP503-201ENST00000517047 117 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 SNORA25.17-201ENST00000517184 124 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM38O00635 AL163153.1-201ENST00000554223 283 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AL117187.1-201ENST00000555482 181 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.58□□□□□ -1.84
TRIM38O00635 AC130324.3-201ENST00000614165 542 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 AL354950.2-201ENST00000617939 290 ntBASIC3.58□□□□□ -1.84
TRIM38O00635 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.58□□□□□ -1.84
TRIM38O00635 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM38O00635 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.58□□□□□ -1.84
TRIM38O00635 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
TRIM38O00635 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM38O00635 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
TRIM38O00635 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
TRIM38O00635 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM38O00635 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM38O00635 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM38O00635 AL139276.1-201ENST00000311910 1001 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TRIM38O00635 RNU6-140P-201ENST00000384566 108 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 MIR301A-201ENST00000385261 86 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AL592114.1-201ENST00000403842 483 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 MIR548F4-201ENST00000408515 105 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 RNU6-1304P-201ENST00000411374 106 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 CBX3P6-201ENST00000430257 527 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AL158071.1-201ENST00000430315 461 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM38O00635 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM38O00635 NDUFB1P1-201ENST00000435191 180 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM38O00635 Z98949.2-201ENST00000440996 144 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AL731563.1-201ENST00000442202 214 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 MTND4P1-201ENST00000457501 1466 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 RNU7-152P-201ENST00000458982 64 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC008155.2-201ENST00000464337 397 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM38O00635 RN7SL283P-201ENST00000489055 303 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.57□□□□□ -1.84
TRIM38O00635 Y_RNA.689-201ENST00000516589 107 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 RNU6-914P-201ENST00000516749 109 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC022634.1-201ENST00000520765 532 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 NDUFB9P3-201ENST00000521269 501 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC103843.2-201ENST00000530523 682 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 AC008011.1-201ENST00000545989 227 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 TGIF1P1-201ENST00000558095 802 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
TRIM38O00635 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.57□□□□□ -1.84
TRIM38O00635 AC008521.1-201ENST00000587471 187 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 NUTF2P8-201ENST00000604593 363 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 XIST_intron.1-201ENST00000619444 68 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 uc_338.22-201ENST00000622722 187 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC011155.2-201ENST00000623202 216 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC004972.1-201ENST00000623934 2209 ntBASIC3.57□□□□□ -1.84
TRIM38O00635 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
TRIM38O00635 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM38O00635 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
TRIM38O00635 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms