Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC093536.2-201ENST00000565257 1406 ntBASIC2.41□□□□□ -2.02
SLC28A1O00337 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SLC28A1O00337 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SLC28A1O00337 RNU6-1072P-201ENST00000384703 107 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 RNU6-443P-201ENST00000384780 107 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 MIR128-1-201ENST00000384921 82 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SLC28A1O00337 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SLC28A1O00337 RNU6-248P-201ENST00000410720 107 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 Y_RNA.623-201ENST00000411128 95 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 RN7SKP142-201ENST00000411236 328 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AL365338.1-201ENST00000422282 858 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 RPL30P4-201ENST00000429309 333 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC098826.1-201ENST00000433943 471 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 GPR143P-201ENST00000434155 205 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AL353706.1-201ENST00000436728 494 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AC107083.1-201ENST00000439643 279 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AP000936.2-201ENST00000447151 681 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 MTND1P27-201ENST00000451117 902 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 EEF1B2P7-201ENST00000451177 676 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC28A1O00337 SNORD109B-201ENST00000458961 67 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 SNORD109A-201ENST00000459128 67 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AC133134.1-201ENST00000466800 359 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AP000852.1-201ENST00000472460 573 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC004924.1-201ENST00000480160 781 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 RPL22P13-201ENST00000493291 347 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AC091965.2-201ENST00000512324 613 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC28A1O00337 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC010186.2-204ENST00000537668 439 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.4□□□□□ -2.03
SLC28A1O00337 AC008521.1-201ENST00000587471 187 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC245014.2-201ENST00000603689 287 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC246785.4-201ENST00000605374 287 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC087045.1-201ENST00000605856 382 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 AC069294.1-201ENST00000608397 350 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 U6.42-201ENST00000618440 107 ntBASIC2.4□□□□□ -2.03
SLC28A1O00337 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.4□□□□□ -2.03
SLC28A1O00337 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
SLC28A1O00337 Y_RNA.367-201ENST00000365544 101 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SLC28A1O00337 SNORA41-201ENST00000384675 132 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 MIR1302-8-201ENST00000408342 128 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 C1DP2-201ENST00000418167 426 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 MTCO3P30-201ENST00000426425 670 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AL627311.1-201ENST00000431514 115 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 CR769767.1-201ENST00000436337 346 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 RPS15AP9-201ENST00000439856 381 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.39□□□□□ -2.03
SLC28A1O00337 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SLC28A1O00337 AC073901.1-201ENST00000462471 408 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AC092325.1-201ENST00000566449 554 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC28A1O00337 AC105245.1-201ENST00000581934 244 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AL670379.4-201ENST00000605279 254 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AC011890.2-201ENST00000613393 294 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 HMGB1P24-202ENST00000615653 685 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AC008147.4-201ENST00000617570 1204 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 U4.3-201ENST00000621047 82 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AC093648.1-201ENST00000623546 606 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AC092608.2-201ENST00000624427 218 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 AC097520.1-201ENST00000624435 385 ntBASIC2.39□□□□□ -2.03
SLC28A1O00337 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SLC28A1O00337 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.39□□□□□ -2.03
SLC28A1O00337 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SLC28A1O00337 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SLC28A1O00337 SNORD3E-201ENST00000362899 217 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 SNORA48.2-201ENST00000390926 124 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 SNORA11.1-201ENST00000408133 129 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC28A1O00337 AC016831.2-201ENST00000417179 352 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC28A1O00337 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.38□□□□□ -2.03
SLC28A1O00337 CALM2P2-201ENST00000428512 440 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC244505.5-201ENST00000443639 207 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 NDUFB1P2-201ENST00000449477 176 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC28A1O00337 MTCYBP1-201ENST00000454315 1119 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC080013.2-201ENST00000460866 323 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 RPS3AP14-201ENST00000483907 780 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 RPL36AP48-201ENST00000485521 314 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AC011005.2-201ENST00000487324 359 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 RN7SKP132-201ENST00000516001 208 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 SNORA31.11-201ENST00000516528 139 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 OR5AQ1P-201ENST00000527596 927 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AP003072.2-201ENST00000527756 676 ntBASIC2.38□□□□□ -2.03
SLC28A1O00337 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.38□□□□□ -2.03
SLC28A1O00337 MIR5571-201ENST00000577998 113 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms