Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC023194.1-201ENST00000493084 308 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC134050.1-201ENST00000495088 933 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC104685.1-201ENST00000502445 371 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC116655.1-201ENST00000508324 901 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.63□□□□□ -2.15
UPK1AO00322 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 ACA59.2-201ENST00000517061 156 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 RPS3AP4-201ENST00000555161 764 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 LINC00933-203ENST00000559812 219 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC104581.2-201ENST00000572227 430 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC136618.2-201ENST00000575091 400 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 MIR3618-201ENST00000580330 88 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.63□□□□□ -2.15
UPK1AO00322 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.63□□□□□ -2.15
UPK1AO00322 RN7SL853P-201ENST00000617250 223 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 MIR6134-201ENST00000617606 109 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AP000484.1-201ENST00000620067 1252 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AL589994.2-201ENST00000621124 579 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 FRG1KP-201ENST00000623592 341 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AP003400.5-201ENST00000624827 617 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 AL512643.1-201ENST00000635735 524 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 Z99571.1-201ENST00000636677 394 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 MTND4P9-201ENST00000507819 1346 ntBASIC1.63□□□□□ -2.15
UPK1AO00322 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.63□□□□□ -2.15
UPK1AO00322 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
UPK1AO00322 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
UPK1AO00322 AL356292.1-201ENST00000283110 373 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC138393.1-203ENST00000327086 343 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 RNU6-188P-201ENST00000364207 107 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 RNU6-898P-201ENST00000365627 104 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 MIR122-201ENST00000385044 85 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 MIR620-201ENST00000385232 95 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 MIR301A-201ENST00000385261 86 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 RNU6-757P-201ENST00000410334 100 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 RNU2-62P-201ENST00000410868 191 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 OR51A5P-201ENST00000415429 942 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 LARP1BP3-201ENST00000437229 869 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 SNORD97-201ENST00000459187 142 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 BZW1P2-201ENST00000473537 826 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 RPL21P99-201ENST00000480369 423 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC018437.1-201ENST00000492214 406 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 MTATP6P15-201ENST00000527233 835 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK1AO00322 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 AC090897.2-201ENST00000581715 130 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 KC877982.1-201ENST00000602313 470 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC104763.2-201ENST00000604179 382 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 RNU4-5P-201ENST00000607255 135 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK1AO00322 AL355472.4-201ENST00000610233 626 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.62□□□□□ -2.15
UPK1AO00322 AC009233.1-201ENST00000616477 371 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC013470.4-201ENST00000619978 986 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.62□□□□□ -2.15
UPK1AO00322 AL445984.1-201ENST00000637834 659 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.62□□□□□ -2.15
UPK1AO00322 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 CDC27P3-201ENST00000635418 1910 ntBASIC1.62□□□□□ -2.15
UPK1AO00322 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UPK1AO00322 RNU6-14P-201ENST00000384630 106 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.61□□□□□ -2.15
UPK1AO00322 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK1AO00322 RPS12P24-201ENST00000412619 387 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 SNORD56-201ENST00000413522 71 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AL353621.1-201ENST00000418219 243 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1AO00322 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 HMGN2P3-201ENST00000433603 273 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 HMGN2P5-201ENST00000436882 273 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 HMGB3P12-201ENST00000438745 556 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK1AO00322 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1AO00322 AL513124.1-201ENST00000450410 614 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 FCF1P6-201ENST00000456841 595 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 USP9YP25-201ENST00000457708 443 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 snoU13.15-201ENST00000459407 104 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AC011005.2-201ENST00000487324 359 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 RPL23AP63-201ENST00000498752 471 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK1AO00322 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK1AO00322 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1AO00322 SNORA31.25-201ENST00000517242 134 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AK6P1-201ENST00000540219 478 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.61□□□□□ -2.15
UPK1AO00322 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.61□□□□□ -2.15
UPK1AO00322 MIR4287-201ENST00000579398 78 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AC007363.1-201ENST00000604736 620 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.61□□□□□ -2.15
UPK1AO00322 AP001486.3-201ENST00000615334 372 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AC017037.3-201ENST00000625016 472 ntBASIC1.61□□□□□ -2.15
UPK1AO00322 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms