Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL356057.3-201ENST00000402607 340 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 MIR1302-8-201ENST00000408342 128 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.37□□□□□ -2.03
PDLIM1O00151 AL109913.1-201ENST00000421173 514 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 NUP35P1-201ENST00000422734 947 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC063976.3-201ENST00000426849 329 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM1O00151 AL591704.1-201ENST00000432574 275 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC009961.2-201ENST00000435771 251 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.37□□□□□ -2.03
PDLIM1O00151 AC233279.1-201ENST00000455300 423 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM1O00151 SNORD109B-201ENST00000458961 67 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 SNORD109A-201ENST00000459128 67 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC108078.2-201ENST00000510750 236 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM1O00151 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.37□□□□□ -2.03
PDLIM1O00151 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM1O00151 AC021739.1-201ENST00000559631 174 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC024619.4-201ENST00000580924 316 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM1O00151 AC073544.2-201ENST00000601155 540 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC135507.1-201ENST00000607214 561 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AL359547.2-201ENST00000615810 418 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AL031601.2-202ENST00000622650 282 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 AC010889.1-201ENST00000566193 2666 ntBASIC2.37□□□□□ -2.03
PDLIM1O00151 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.37□□□□□ -2.03
PDLIM1O00151 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PDLIM1O00151 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM1O00151 RNU1-52P-201ENST00000384190 164 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AL355497.1-201ENST00000406262 551 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 RNA5SP184-201ENST00000411071 108 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC096649.2-201ENST00000416186 393 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC007560.1-201ENST00000426912 237 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM1O00151 RPL31P35-201ENST00000431058 377 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 BRK1P2-201ENST00000442875 223 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC244505.5-201ENST00000443639 207 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC104389.3-201ENST00000445629 235 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.36□□□□□ -2.03
PDLIM1O00151 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM1O00151 EIF4EP3-201ENST00000498782 656 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.36□□□□□ -2.03
PDLIM1O00151 AC109927.2-201ENST00000506416 303 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 SCARNA24.1-201ENST00000516465 137 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 RNU6-572P-201ENST00000516724 80 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 RNU6-1315P-201ENST00000517187 99 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AP003122.3-201ENST00000526316 255 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.36□□□□□ -2.03
PDLIM1O00151 AC084851.1-201ENST00000529105 249 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.36□□□□□ -2.03
PDLIM1O00151 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM1O00151 AC009127.3-201ENST00000570531 403 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC007151.1-201ENST00000572774 483 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 MIR4782-201ENST00000577987 79 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 MIR3162-201ENST00000581818 82 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM1O00151 AL356280.1-201ENST00000603614 379 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 APOOP1-201ENST00000604695 592 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AC064872.1-201ENST00000604823 1072 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.36□□□□□ -2.03
PDLIM1O00151 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PDLIM1O00151 AC009487.4-201ENST00000624969 3585 ntBASIC2.36□□□□□ -2.03
PDLIM1O00151 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PDLIM1O00151 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AL109809.4-201ENST00000603520 2185 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PDLIM1O00151 RNU6-859P-201ENST00000362728 107 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 Y_RNA.111-201ENST00000363248 100 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 SNORA24.1-201ENST00000384401 135 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 RNU6-1025P-201ENST00000410629 104 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 USP9YP6-201ENST00000413550 854 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 C1DP2-201ENST00000418167 426 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 SRIP2-201ENST00000428470 166 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.35□□□□□ -2.03
PDLIM1O00151 HMGN2P10-201ENST00000448085 265 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AL109933.2-201ENST00000452651 260 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 RNU6-956P-201ENST00000458868 103 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 TRBV1-201ENST00000476502 284 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AC098591.2-201ENST00000510152 315 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM1O00151 AC117532.1-201ENST00000514638 323 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 AC022447.1-201ENST00000515358 464 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 RNU6-123P-201ENST00000516163 102 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 RNU6-1183P-201ENST00000517054 60 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 SCARNA11.3-201ENST00000517276 130 ntBASIC2.35□□□□□ -2.03
PDLIM1O00151 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms