Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC188H7C350 MTND5P30-201ENST00000452896 1731 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 MIR412-201ENST00000362142 91 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 U8.8-201ENST00000365399 135 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 RNU6-108P-201ENST00000365558 107 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 SNORD116-9-201ENST00000384000 95 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 SNORD116-3-201ENST00000384287 95 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 RNU6-166P-201ENST00000384371 107 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 SNORD116-7-201ENST00000384404 95 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 SNORD116-5-201ENST00000384462 95 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 Y_RNA.553-201ENST00000384670 102 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 Y_RNA.576-201ENST00000384781 102 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 MIR34A-201ENST00000385130 110 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC188H7C350 USP9YP20-201ENST00000419224 558 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC188H7C350 Z98742.2-201ENST00000431564 187 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 MTND4P32-201ENST00000437189 1237 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC188H7C350 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC188H7C350 AL360221.1-201ENST00000445989 335 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AL671855.1-201ENST00000446875 1203 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AC104058.1-201ENST00000448028 297 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AP001486.1-201ENST00000463339 476 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AC133134.1-201ENST00000466800 359 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 FAM92A1P2-202ENST00000504766 877 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 MTND4P2-201ENST00000507767 1203 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 HIGD1AP13-201ENST00000509878 289 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 RNA5SP503-201ENST00000517047 117 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC188H7C350 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC188H7C350 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC188H7C350 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC188H7C350 CYCSP39-201ENST00000565821 309 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 MIR5692A1-201ENST00000580523 69 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC188H7C350 AC091152.3-201ENST00000604227 325 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 AL589743.7-201ENST00000612637 233 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 SEPT14P19-203ENST00000633205 211 ntBASIC2.69□□□□□ -1.98
CCDC188H7C350 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC188H7C350 AC131280.1-202ENST00000624067 4211 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
CCDC188H7C350 RNU1-112P-201ENST00000364401 164 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 RNU6-282P-201ENST00000365357 103 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 SNORA18.3-201ENST00000384122 132 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 Y_RNA.510-201ENST00000384511 114 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 MIR218-1-201ENST00000384999 110 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 MIR10A-201ENST00000385043 110 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 Y_RNA.623-201ENST00000411128 95 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC188H7C350 AL096701.2-201ENST00000416920 238 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC188H7C350 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CCDC188H7C350 RPL35AP12-201ENST00000425362 338 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AL445687.1-201ENST00000439946 251 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC188H7C350 AC079448.1-201ENST00000449377 373 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 C1DP4-201ENST00000455429 424 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 RPS29P15-201ENST00000458329 171 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AP001324.2-201ENST00000461163 319 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC116655.1-201ENST00000508324 901 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC023141.11-201ENST00000508864 202 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC188H7C350 AC112206.3-201ENST00000514578 389 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 ACA59.2-201ENST00000517061 156 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC188H7C350 AP002963.1-201ENST00000530590 184 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 MIR3611-201ENST00000584484 83 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC008521.1-201ENST00000587471 187 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AL022154.1-201ENST00000604698 785 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC005332.10-201ENST00000612725 619 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 AC011890.2-201ENST00000613393 294 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 MIR6134-201ENST00000617606 109 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC188H7C350 ZNF271P-202ENST00000465539 1970 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 MTND5P17-201ENST00000418405 1603 ntBASIC2.68□□□□□ -1.98
CCDC188H7C350 SNORD3E-201ENST00000362899 217 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 RNU6-181P-201ENST00000363225 107 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC188H7C350 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC188H7C350 RNU6-348P-201ENST00000384386 107 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 MIR9-1-201ENST00000385198 89 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 UBA52P6-201ENST00000399822 382 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 RNU2-9P-201ENST00000410194 145 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 RNU2-25P-201ENST00000411041 191 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 CR769767.1-201ENST00000436337 346 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 MTCO1P19-201ENST00000443487 500 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 RNU7-182P-201ENST00000459009 62 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 AC006512.1-201ENST00000468816 291 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC188H7C350 AC079382.1-201ENST00000493346 557 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.67□□□□□ -1.98
CCDC188H7C350 SNORA31.6-201ENST00000516241 130 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 RNU6-445P-201ENST00000516949 107 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 RNA5SP402-201ENST00000517148 110 ntBASIC2.67□□□□□ -1.98
CCDC188H7C350 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC188H7C350 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms