Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AC098799.2-201ENST00000509466 868 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC026436.1-201ENST00000510537 270 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 RNU4-29P-201ENST00000515943 174 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 RNU6-445P-201ENST00000516949 107 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 MTCO2P4-201ENST00000517968 247 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC078814.3-201ENST00000553036 491 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC090616.3-201ENST00000582184 217 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AL359999.1-201ENST00000604513 294 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC126118.1-201ENST00000607744 628 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC067747.1-201ENST00000608026 250 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AC108479.2-201ENST00000617314 601 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AL160394.1-201ENST00000624765 724 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 MIR7515-201ENST00000637837 67 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 FARSBP1-201ENST00000435808 1778 ntBASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
TRIM49BA6NDI0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 RNU6-511P-201ENST00000363496 107 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 RNU6-1090P-201ENST00000364065 94 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 RNU2-9P-201ENST00000410194 145 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AL096701.2-201ENST00000416920 238 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 ELOCP4-201ENST00000420090 333 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC119618.1-201ENST00000434191 222 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 USP9YP28-201ENST00000435142 589 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AL445687.1-201ENST00000439946 251 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC104389.3-201ENST00000445629 235 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 RPS3AP17-201ENST00000472594 777 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 RNU6-927P-201ENST00000516199 100 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 Y_RNA.704-201ENST00000516851 102 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 RNA5SP471-201ENST00000516971 106 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 SCARNA11.3-201ENST00000517276 130 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC090572.1-201ENST00000519251 160 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC093012.1-202ENST00000549403 582 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC087883.1-201ENST00000551882 391 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 NACAP3-201ENST00000552100 481 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 TPRKBP2-201ENST00000565969 475 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC234778.2-201ENST00000566241 354 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 KC877982.1-201ENST00000602313 470 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC007621.1-201ENST00000604544 437 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AL158209.2-201ENST00000619266 216 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 MIR6863-201ENST00000636112 90 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC068137.3-201ENST00000639191 341 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 AC073869.6-201ENST00000640656 341 ntBASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM49BA6NDI0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 RNA5SP126-201ENST00000365092 109 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 RPS4XP8-201ENST00000402039 771 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AL139397.2-201ENST00000404529 772 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 RNU2-49P-201ENST00000410666 184 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 NDUFS5P4-201ENST00000412983 318 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 ELOCP17-201ENST00000414751 326 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC096649.2-201ENST00000416186 393 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 BTF3L4P3-201ENST00000418879 476 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 MTCO2P19-201ENST00000427513 598 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC073464.1-201ENST00000429823 534 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 SNRPEP9-201ENST00000436794 238 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 MTND1P12-201ENST00000455231 147 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 SNRPFP4-201ENST00000456366 242 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 RNU6-718P-201ENST00000516166 105 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 Vault.3-201ENST00000516676 95 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 RNA5SP402-201ENST00000517148 110 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 SUB1P2-201ENST00000556401 297 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AL391840.1-201ENST00000571144 367 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC107304.1-201ENST00000604229 296 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 Z84480.1-201ENST00000605131 311 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC103710.1-201ENST00000610003 901 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 AC090970.3-201ENST00000612566 866 ntBASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM49BA6NDI0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms