Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 AL162373.1-201ENST00000620433 407 ntBASIC1.91□□□□□ -2.1
TRBV11-1A0A0K0K1C0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.91□□□□□ -2.1
TRBV11-1A0A0K0K1C0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
TRBV11-1A0A0K0K1C0 AL359851.1-201ENST00000569460 4997 ntBASIC1.91□□□□□ -2.1
TRBV11-1A0A0K0K1C0 KPNA2P1-201ENST00000458289 1591 ntBASIC1.9□□□□□ -2.1
TRBV11-1A0A0K0K1C0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU1-72P-201ENST00000362976 153 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MIR561-201ENST00000385216 97 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL139156.1-201ENST00000412785 841 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MTATP6P19-201ENST00000413797 659 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC009518.2-201ENST00000418056 731 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC012308.1-201ENST00000451232 178 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 PMCHL2-203ENST00000457791 237 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC117503.1-201ENST00000472241 394 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RPS3AP22-201ENST00000488297 769 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 UBE2V1P12-201ENST00000503954 474 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC091951.3-201ENST00000504093 246 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-914P-201ENST00000516749 109 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC123904.2-201ENST00000548059 300 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC012435.1-202ENST00000568772 240 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL031274.2-201ENST00000599419 203 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC112187.2-201ENST00000604345 283 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-91P-201ENST00000607774 107 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC092953.2-201ENST00000608000 699 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC009974.1-201ENST00000608881 455 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL391813.2-201ENST00000609113 322 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC096772.1-201ENST00000609146 564 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC022202.1-201ENST00000613515 211 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL139418.1-201ENST00000613613 177 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 uc_338.12-201ENST00000616344 181 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC006338.1-201ENST00000618453 749 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC008121.3-201ENST00000618726 433 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC091953.2-201ENST00000623979 160 ntBASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-83P-201ENST00000384568 112 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 Y_RNA.534-201ENST00000384599 112 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MIR518D-201ENST00000385014 87 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 SNORA46.1-201ENST00000391069 153 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 SNORA40C-201ENST00000391285 128 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC138623.1-201ENST00000418060 216 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL591704.1-201ENST00000432574 275 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL009048.1-201ENST00000450437 298 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 snoU13.15-201ENST00000459407 104 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MTND4P2-201ENST00000507767 1203 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC116347.2-201ENST00000514912 523 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-1092P-201ENST00000516955 87 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC107953.1-201ENST00000522216 297 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL157871.3-201ENST00000557231 293 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MTCO2P2-201ENST00000591258 225 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC105148.1-201ENST00000604961 409 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC121334.2-201ENST00000605387 271 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC108747.1-201ENST00000609508 535 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 SDR42E1P4-201ENST00000620894 481 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 Y_RNA.33-201ENST00000362591 102 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-1159P-201ENST00000362933 107 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 SNORD114-19-201ENST00000363072 75 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-190P-201ENST00000384154 102 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RNU6-166P-201ENST00000384371 107 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 U8.14-201ENST00000390843 143 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 RPS20P2-201ENST00000402520 389 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 FTH1P15-201ENST00000406984 280 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC127391.1-201ENST00000411737 98 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL356379.1-201ENST00000414105 126 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AL354692.1-201ENST00000423044 315 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 MTCO2P23-201ENST00000425216 680 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
TRBV11-1A0A0K0K1C0 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms