Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 AC074250.1-201ENST00000511117 192 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 RNU1-103P-201ENST00000516502 125 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 BTF3P12-201ENST00000519620 469 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AC023050.3-201ENST00000541142 333 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 TRAV37-201ENST00000553906 342 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 OR11H5P-201ENST00000554039 926 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 TGIF1P1-201ENST00000558095 802 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AC073539.2-201ENST00000597113 165 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AL355598.1-201ENST00000604169 202 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 MTND4LP5-201ENST00000605152 292 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AC004832.5-201ENST00000608677 401 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 DUXAP9-208ENST00000622815 614 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 AC090617.10-201ENST00000624308 134 ntBASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLDN16Q9Y5I7 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC010733.2-201ENST00000589496 5702 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 MIR412-201ENST00000362142 91 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-82P-201ENST00000363970 107 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AP002088.1-201ENST00000382740 395 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 Y_RNA.399-201ENST00000383955 105 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RNY3P14-201ENST00000384309 102 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 MIR34B-201ENST00000385076 84 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 MIR888-201ENST00000401186 77 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC126124.2-201ENST00000413542 321 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RPL21P111-201ENST00000418453 477 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RPL37P4-201ENST00000448908 268 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AL583843.1-201ENST00000456070 346 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RPL26P9-201ENST00000457466 433 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 DYNLL1P5-201ENST00000467158 270 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC114786.4-201ENST00000508771 728 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC009902.1-201ENST00000519351 183 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RPL7P20-201ENST00000520308 745 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC005730.3-201ENST00000583067 366 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 MIR4276-201ENST00000584832 70 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC018638.8-201ENST00000588755 281 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 VN1R80P-201ENST00000597126 338 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RMST_8.1-201ENST00000610287 165 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC090617.7-201ENST00000623952 126 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 MAPK10-322ENST00000641485 4530 ntBASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
CLDN16Q9Y5I7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AC017071.1-201ENST00000564407 2204 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 SNORD3E-201ENST00000362899 217 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 SNORA72.1-201ENST00000363485 129 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 SNORA70.4-201ENST00000365509 134 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 RNA5SP354-201ENST00000391247 136 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AL356968.1-201ENST00000416622 474 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 RPL31P12-201ENST00000422587 358 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AL353729.1-201ENST00000425044 720 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 TOMM20P4-201ENST00000427861 435 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AL353705.1-201ENST00000433468 480 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 BRK1P2-201ENST00000442875 223 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AL078601.1-201ENST00000444542 271 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 PRSS3P4-201ENST00000453323 162 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AC010099.1-201ENST00000455434 375 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AC010486.1-201ENST00000511793 424 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 H3F3AP1-201ENST00000559984 334 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 MIR4782-201ENST00000577987 79 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 MIR4425-201ENST00000580572 84 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 SRGNP1-201ENST00000603392 451 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 MIR7112-201ENST00000616126 65 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 AL031601.2-202ENST00000622650 282 ntBASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.1□□□□□ -1.91
CLDN16Q9Y5I7 Z83843.1-201ENST00000604070 3685 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms