Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 SNRPEP4-201ENST00000435815 279 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC006028.1-201ENST00000438379 402 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC125238.1-201ENST00000448842 249 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC091951.2-201ENST00000500762 203 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC006445.2-201ENST00000510061 472 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC074250.1-201ENST00000511117 192 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 RNU6-507P-201ENST00000516045 100 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC107953.1-201ENST00000522216 297 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC090115.3-201ENST00000553218 849 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 MIR3941-201ENST00000582572 103 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC073539.2-201ENST00000597113 165 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 ATP1B3P1-201ENST00000605365 821 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC008962.1-201ENST00000605729 304 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC104260.1-201ENST00000616660 539 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 MIR6076-201ENST00000617521 113 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC118273.1-201ENST00000525324 3006 ntBASIC3.23□□□□□ -1.89
PKP3Q9Y446 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PKP3Q9Y446 AC093010.3-201ENST00000570269 15214 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP3Q9Y446 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 Y_RNA.167-201ENST00000363735 109 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 MIR34B-201ENST00000385076 84 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 RNU6-1009P-201ENST00000390996 107 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 EIF4E2P1-201ENST00000393781 255 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 SNORA11-201ENST00000408789 128 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPLP0P7-201ENST00000416050 667 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPL7P10-201ENST00000417407 739 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 USP9YP20-201ENST00000419224 558 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 AC245291.1-201ENST00000419501 328 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 MTCO3P46-201ENST00000425787 232 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPL23AP22-201ENST00000437556 453 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 HIGD1AP11-201ENST00000438361 280 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 AL590664.1-201ENST00000448065 339 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPL12P25-201ENST00000455592 494 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPS27P29-201ENST00000463110 252 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPL7P49-201ENST00000471402 708 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 RPL30P14-201ENST00000482744 348 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 HMGB1P30-201ENST00000492455 606 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 AC022493.1-201ENST00000492984 337 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 RNU6-875P-201ENST00000516488 106 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 HMGB1P14-201ENST00000557424 591 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 MIR3944-201ENST00000581277 108 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 AC009994.1-201ENST00000606889 253 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 FTX_3.1-201ENST00000610451 147 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 DUSP12P1-201ENST00000612874 516 ntBASIC3.22□□□□□ -1.89
PKP3Q9Y446 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PKP3Q9Y446 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.22□□□□□ -1.89
PKP3Q9Y446 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
PKP3Q9Y446 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
PKP3Q9Y446 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.21□□□□□ -1.89
PKP3Q9Y446 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
PKP3Q9Y446 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PKP3Q9Y446 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PKP3Q9Y446 RNA5SP267-201ENST00000364893 126 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 RNU6-1035P-201ENST00000384477 107 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC005326.1-201ENST00000429197 123 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 AL671855.1-201ENST00000446875 1203 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC091153.1-201ENST00000466297 402 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC139453.3-201ENST00000493276 369 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC079140.5-201ENST00000507882 310 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 MTND3P25-201ENST00000509243 135 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 TBCAP3-201ENST00000512475 312 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC114781.4-201ENST00000513707 639 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 SNORA19.2-201ENST00000516013 114 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 SNORA64.4-201ENST00000516632 81 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 RN7SKP256-201ENST00000517201 314 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC009902.1-201ENST00000519351 183 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 CTHRC1P1-201ENST00000605383 469 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AL357078.3-201ENST00000607528 618 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC069200.1-201ENST00000609511 323 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 AL591516.1-201ENST00000611326 274 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 uc_338.25-201ENST00000613756 156 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 AC005183.1-201ENST00000603687 1979 ntBASIC3.21□□□□□ -1.9
PKP3Q9Y446 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
PKP3Q9Y446 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms