Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 ARL2BPP4-201ENST00000506854 471 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 ADI1P3-201ENST00000549509 470 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 AC026464.5-201ENST00000562497 722 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 AL355598.1-201ENST00000604169 202 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 UCA1.1-201ENST00000620952 75 ntBASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHROOM4Q9ULL8 NACAP2-201ENST00000318548 624 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 RNU6-39P-201ENST00000384344 107 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 RNU6-195P-201ENST00000411352 109 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 BX295541.1-201ENST00000417774 250 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AL358075.3-201ENST00000426289 226 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AC244505.5-201ENST00000443639 207 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 RAP1BP2-201ENST00000478270 544 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 SUMO2P6-201ENST00000505273 288 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AL355877.2-201ENST00000603670 358 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 AL353997.5-201ENST00000618886 171 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 MIR3199-2-201ENST00000636243 86 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 MTND4P35-201ENST00000604257 1375 ntBASIC4.63□□□□□ -1.67
SHROOM4Q9ULL8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 SNORD21-201ENST00000383953 95 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 RNU6-641P-201ENST00000384006 107 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 SNORD116-1-201ENST00000384335 95 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 RPL26P27-201ENST00000414397 437 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL592045.1-201ENST00000429867 352 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 KATNBL1P3-201ENST00000443475 909 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 Z83846.1-201ENST00000446798 265 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL359212.1-201ENST00000556608 614 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC064872.1-201ENST00000604823 1072 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC013562.2-201ENST00000611632 603 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 Z99571.1-201ENST00000636677 394 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL109913.1-201ENST00000421173 514 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC009414.1-201ENST00000427200 443 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC244505.4-201ENST00000434905 287 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 RPL23AP58-201ENST00000440453 469 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 SSXP5-201ENST00000443473 287 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 USP9YP29-201ENST00000445112 563 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 MTATP6P26-201ENST00000445926 662 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 DPPA3P1-201ENST00000448050 469 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 RPL23AP45-201ENST00000476406 468 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC126182.1-201ENST00000478134 357 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 RNU6-703P-201ENST00000516946 107 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC093331.1-201ENST00000521474 169 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL356057.1-201ENST00000533798 831 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 MIR98-201ENST00000606724 119 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 AL512643.1-201ENST00000635735 524 ntBASIC4.62□□□□□ -1.67
SHROOM4Q9ULL8 ZNF519P1-201ENST00000449011 1626 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AC110491.1-201ENST00000562191 2010 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 Y_RNA.796-201ENST00000364268 102 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 Y_RNA.799-201ENST00000364992 102 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 SNORA4.3-201ENST00000365564 137 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 C1DP2-201ENST00000418167 426 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AL022238.1-201ENST00000442557 355 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AC079781.2-201ENST00000446424 169 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AC022634.1-201ENST00000520765 532 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 AC135507.1-201ENST00000607214 561 ntBASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SHROOM4Q9ULL8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 RNU6-248P-201ENST00000410720 107 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 MTND3P17-201ENST00000416968 344 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 AC098831.1-201ENST00000440661 216 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 BRK1P2-201ENST00000442875 223 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 OR5BN1P-201ENST00000532955 829 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 MIR1273C-201ENST00000578669 77 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 AC098848.2-201ENST00000588023 330 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 AL139286.2-201ENST00000606838 396 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 MIR1291-201ENST00000627649 87 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 CU459211.1-201ENST00000635667 749 ntBASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SHROOM4Q9ULL8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms