Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.18□□□□□ -2.06
CDH9Q9ULB4 AP000860.1-201ENST00000605250 559 ntBASIC2.18□□□□□ -2.06
CDH9Q9ULB4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.18□□□□□ -2.06
CDH9Q9ULB4 AL365204.3-201ENST00000612448 685 ntBASIC2.18□□□□□ -2.06
CDH9Q9ULB4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CDH9Q9ULB4 AL512643.1-201ENST00000635735 524 ntBASIC2.18□□□□□ -2.06
CDH9Q9ULB4 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDH9Q9ULB4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.18□□□□□ -2.06
CDH9Q9ULB4 TEX21P-201ENST00000447107 1476 ntBASIC2.18□□□□□ -2.06
CDH9Q9ULB4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 SNORD113-6-201ENST00000363345 75 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 RNU6-511P-201ENST00000363496 107 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 MIR301A-201ENST00000385261 86 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 FCF1P10-201ENST00000407590 479 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 RNU2-2P-201ENST00000410396 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AL139156.1-201ENST00000412785 841 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC072039.1-201ENST00000477611 581 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 GTF2IP9-201ENST00000502460 301 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC008526.1-201ENST00000509149 338 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 MRPS33P3-201ENST00000513456 322 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC025755.1-201ENST00000521306 278 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AL121917.1-203ENST00000605534 577 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.15-201ENST00000611544 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.16-201ENST00000613119 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC016597.2-201ENST00000613256 341 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.12-201ENST00000613778 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.20-201ENST00000613956 192 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.9-201ENST00000615427 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.11-201ENST00000616345 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.2-201ENST00000616535 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.3-201ENST00000617785 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.19-201ENST00000618602 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 RNU2-1-201ENST00000618664 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.6-201ENST00000619225 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.5-201ENST00000619465 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 U2.10-201ENST00000620268 191 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC244517.12-201ENST00000623581 663 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.17□□□□□ -2.06
CDH9Q9ULB4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.17□□□□□ -2.06
CDH9Q9ULB4 RNU6-660P-201ENST00000364566 109 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RNU6-1280P-201ENST00000365211 107 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 Y_RNA.534-201ENST00000384599 112 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 GSTA9P-201ENST00000406231 611 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RPS27AP14-201ENST00000422868 454 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 EIF4EP4-201ENST00000424916 578 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 WARS2P1-201ENST00000429678 537 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RPL37P21-201ENST00000435890 276 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 IPO7P1-201ENST00000442031 636 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 UBL5P3-201ENST00000475112 231 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RPL38P4-201ENST00000502376 214 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC116655.1-201ENST00000508324 901 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AF213884.2-201ENST00000510417 903 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC116347.2-201ENST00000514912 523 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 ACA59.2-201ENST00000517061 156 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 LINC00933-203ENST00000559812 219 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AL354943.1-201ENST00000572103 781 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC018714.1-201ENST00000605028 208 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC107952.2-201ENST00000606048 486 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 TUSC7.1-201ENST00000610969 165 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AL031601.2-202ENST00000622650 282 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 Z75746.1-201ENST00000440243 2080 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 AC092104.1-201ENST00000497346 1441 ntBASIC2.16□□□□□ -2.06
CDH9Q9ULB4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDH9Q9ULB4 RNU5E-6P-201ENST00000365574 115 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH9Q9ULB4 AC006366.1-201ENST00000422002 759 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 AL591704.1-201ENST00000432574 275 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH9Q9ULB4 AL591212.2-201ENST00000433923 257 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH9Q9ULB4 AL354941.1-201ENST00000438600 464 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.15□□□□□ -2.07
CDH9Q9ULB4 GDI2P2-201ENST00000445131 608 ntBASIC2.15□□□□□ -2.07
CDH9Q9ULB4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms