Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MARK2P15-201ENST00000432204 2186 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC098614.2-201ENST00000426040 255 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AL358472.1-201ENST00000431295 329 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 RPS3AP46-201ENST00000448352 682 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 PCNPP5-201ENST00000452246 481 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC079354.2-201ENST00000453523 154 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MTCO3P8-201ENST00000453691 755 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 RN7SL542P-201ENST00000467147 294 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 S100A11P1-201ENST00000477525 312 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AL132838.2-201ENST00000492041 314 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC104564.1-201ENST00000493028 407 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-572P-201ENST00000516724 80 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC109329.1-201ENST00000518744 317 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC125232.2-201ENST00000592457 143 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC004805.2-201ENST00000605382 482 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC009318.2-201ENST00000610917 651 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MIR1244-1-201ENST00000612829 85 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 HMGB1P24-202ENST00000615653 685 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MIR8059-201ENST00000620427 81 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AC103858.2-201ENST00000621471 543 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MIR1244-3-201ENST00000635744 85 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MIR1244-2-201ENST00000636449 85 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 MIR1244-4-202ENST00000636813 85 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 U4.7-201ENST00000638126 106 ntBASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.69□□□□□ -1.82
CDC42EP3Q9UKI2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 U3.6-201ENST00000363622 211 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 SNORD74.4-201ENST00000364129 80 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC007098.1-201ENST00000420122 367 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 ELOCP20-201ENST00000422460 345 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 Z74021.1-201ENST00000423610 407 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 TOMM20P4-201ENST00000427861 435 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RPL23AP83-201ENST00000434984 473 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 SNRPEP9-201ENST00000436794 238 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RPS3AP12-201ENST00000443616 753 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RPL31P13-201ENST00000484151 370 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 PPBPP1-201ENST00000510807 373 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 SNORA25.11-201ENST00000515935 105 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RNU2-53P-201ENST00000516257 147 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-612P-201ENST00000516909 102 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-703P-201ENST00000516946 107 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 RPL7P50-201ENST00000600588 727 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC008739.3-201ENST00000603262 127 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC113403.1-201ENST00000604910 193 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 uc_338.13-201ENST00000618243 179 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC099506.2-201ENST00000623074 221 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC233263.6-201ENST00000631132 1963 ntBASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CDC42EP3Q9UKI2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 SNORD46.1-201ENST00000364139 104 ntBASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 RNU4-50P-201ENST00000364361 141 ntBASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 RNU6-1026P-201ENST00000384465 108 ntBASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 MIR3074-201ENST00000384885 81 ntBASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 MIR200C-201ENST00000384980 68 ntBASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.67□□□□□ -1.82
CDC42EP3Q9UKI2 MTCO3P19-201ENST00000415864 321 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms