Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL121890.5-201ENST00000620848 304 ntBASIC0.6□□□□□ -2.31
SCN11AQ9UI33 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.59□□□□□ -2.32
SCN11AQ9UI33 AC083875.1-201ENST00000419509 405 ntBASIC0.59□□□□□ -2.32
SCN11AQ9UI33 PIGFP2-201ENST00000421400 651 ntBASIC0.59□□□□□ -2.32
SCN11AQ9UI33 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC0.59□□□□□ -2.32
SCN11AQ9UI33 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.59□□□□□ -2.32
SCN11AQ9UI33 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.59□□□□□ -2.32
SCN11AQ9UI33 ZNF92P3-201ENST00000596594 954 ntBASIC0.59□□□□□ -2.32
SCN11AQ9UI33 AL627230.5-201ENST00000619807 58 ntBASIC0.59□□□□□ -2.32
SCN11AQ9UI33 RNU6-1243P-201ENST00000364028 107 ntBASIC0.58□□□□□ -2.32
SCN11AQ9UI33 MIR100-201ENST00000385259 80 ntBASIC0.58□□□□□ -2.32
SCN11AQ9UI33 RNU6-712P-201ENST00000410558 100 ntBASIC0.58□□□□□ -2.32
SCN11AQ9UI33 UBE2V2P3-201ENST00000433562 437 ntBASIC0.58□□□□□ -2.32
SCN11AQ9UI33 RNA5SP57-201ENST00000459463 123 ntBASIC0.58□□□□□ -2.32
SCN11AQ9UI33 RNU6-902P-201ENST00000517212 91 ntBASIC0.58□□□□□ -2.32
SCN11AQ9UI33 RNU1-96P-201ENST00000364163 162 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 RNU6-733P-201ENST00000410759 104 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN11AQ9UI33 PRPS1P1-201ENST00000445305 876 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 ARPC3P5-201ENST00000448802 534 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN11AQ9UI33 HMGB1P36-201ENST00000487709 576 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AC134050.1-201ENST00000495088 933 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.57□□□□□ -2.32
SCN11AQ9UI33 Y_RNA.493-201ENST00000384422 102 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 SNORD65-201ENST00000391079 73 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AC023141.4-201ENST00000412031 328 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AL589880.1-201ENST00000448271 287 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.57□□□□□ -2.32
SCN11AQ9UI33 SNORA31.22-201ENST00000517204 135 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AC026271.5-201ENST00000577873 130 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AL669831.4-202ENST00000590817 238 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 AC069294.1-201ENST00000608397 350 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 RMST_5.1-201ENST00000618704 126 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 Z99571.1-201ENST00000636677 394 ntBASIC0.57□□□□□ -2.32
SCN11AQ9UI33 RNU6-1251P-201ENST00000364502 107 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 RNU4-67P-201ENST00000364569 141 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AC009518.2-201ENST00000418056 731 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AC104164.3-201ENST00000467363 1258 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 SNORA48.9-201ENST00000516419 162 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AC004923.2-201ENST00000529649 369 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.56□□□□□ -2.32
SCN11AQ9UI33 EIF4A1P12-201ENST00000551910 141 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AC019288.1-201ENST00000557918 224 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 MIR8074-201ENST00000615081 81 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AC100821.1-201ENST00000523153 2479 ntBASIC0.56□□□□□ -2.32
SCN11AQ9UI33 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 NDUFB4P7-201ENST00000423198 363 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC092634.2-201ENST00000428146 1010 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AL135790.2-201ENST00000437701 267 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 RPL26P9-201ENST00000457466 433 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 RPL30P7-201ENST00000479312 323 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC138853.1-201ENST00000503549 823 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 RNA5SP285-201ENST00000516619 119 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AP003327.1-201ENST00000529684 127 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC002550.2-201ENST00000621246 394 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 MIR338-201ENST00000636369 67 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 OR5H6-203ENST00000642105 978 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC009310.1-201ENST00000414414 451 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC147055.4-201ENST00000504399 745 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.55□□□□□ -2.32
SCN11AQ9UI33 AC090115.3-201ENST00000553218 849 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 MIR5589-201ENST00000579442 60 ntBASIC0.55□□□□□ -2.32
SCN11AQ9UI33 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SCN11AQ9UI33 RNA5SP299-201ENST00000391203 116 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 U6atac.2-201ENST00000408644 118 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 AC112492.4-201ENST00000456549 352 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 SCARNA16.2-201ENST00000516520 172 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 HAUS1P3-201ENST00000523909 662 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.54□□□□□ -2.32
SCN11AQ9UI33 AL139344.1-201ENST00000605228 195 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 AC009974.1-201ENST00000608881 455 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 U6.48-201ENST00000618523 106 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
SCN11AQ9UI33 OR5T3-201ENST00000303059 1023 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 SNRPEP3-201ENST00000338402 276 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 RNU6-270P-201ENST00000364131 105 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.32
SCN11AQ9UI33 RNU6-1035P-201ENST00000384477 107 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 MRPL35P1-201ENST00000404272 572 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 POLR2KP1-201ENST00000553226 168 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.53□□□□□ -2.32
SCN11AQ9UI33 AC022387.2-201ENST00000604050 448 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 AC104763.3-201ENST00000613765 618 ntBASIC0.53□□□□□ -2.32
SCN11AQ9UI33 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms