Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC090616.3-201ENST00000582184 217 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 MIR3616-201ENST00000584070 92 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC068790.3-201ENST00000602988 553 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC112187.2-201ENST00000604345 283 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC098614.4-201ENST00000607601 462 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 AC025594.3-201ENST00000613068 790 ntBASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CLIP2Q9UDT6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 RNU6-461P-201ENST00000364195 107 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 SNORA68.1-201ENST00000364537 132 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 Y_RNA.302-201ENST00000364997 102 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 RNU6-348P-201ENST00000384386 107 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 U3.37-201ENST00000408528 213 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 HMGB1P11-201ENST00000413899 637 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 GTF2IP20-201ENST00000431663 360 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AL139415.2-201ENST00000431968 163 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 MTATP6P13-201ENST00000438531 667 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AL353572.1-201ENST00000442490 417 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC072039.1-201ENST00000477611 581 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 MRPS36P2-201ENST00000512569 299 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AP000873.5-201ENST00000533906 236 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC087241.2-201ENST00000535801 324 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC245505.1-201ENST00000556398 224 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 MTCYBP22-201ENST00000603788 447 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 AC138749.5-201ENST00000611461 208 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CLIP2Q9UDT6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 MIR21-201ENST00000362134 72 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 U8.2-201ENST00000363156 134 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 RNU6-867P-201ENST00000364956 107 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 Y_RNA.303-201ENST00000364998 94 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 MIR524-201ENST00000385242 87 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AL359634.1-202ENST00000404721 284 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 RN7SKP284-201ENST00000411002 343 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 FCF1P9-201ENST00000412546 282 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 USP9YP13-201ENST00000417797 480 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC010975.2-201ENST00000427781 588 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 MRPS10P2-201ENST00000431226 381 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AL596276.1-201ENST00000434465 418 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 MTND1P28-201ENST00000435623 950 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 MRPL42P6-201ENST00000486397 371 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 SUMO2P6-201ENST00000505273 288 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC107222.1-201ENST00000510899 637 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 RNU6-390P-201ENST00000516259 103 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 RNU6-405P-201ENST00000516637 110 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AP003467.2-201ENST00000520175 319 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 ZNF519P3-201ENST00000557158 1032 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC009063.1-201ENST00000563342 702 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC092354.1-201ENST00000606057 376 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC091965.4-201ENST00000607691 587 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC103710.1-201ENST00000610003 901 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC072046.2-201ENST00000618366 268 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AL603839.4-201ENST00000624658 1005 ntBASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.74□□□□□ -1.97
CLIP2Q9UDT6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 Y_RNA.18-201ENST00000362461 102 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 RNU6-253P-201ENST00000384730 105 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AL445687.1-201ENST00000439946 251 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 MTND1P30-201ENST00000441241 901 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 MRPS17P3-201ENST00000465453 385 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 HMGB3P3-201ENST00000510526 400 ntBASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.73□□□□□ -1.97
CLIP2Q9UDT6 RNU6-678P-201ENST00000516832 109 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms