Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR7851-201ENST00000610611 160 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL732372.2-225ENST00000642124 456 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC007823.1-201ENST00000569932 1566 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC110774.1-201ENST00000623567 2018 ntBASIC3.63□□□□□ -1.83
DKK3Q9UBP4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 HSPA8P4-201ENST00000511877 1920 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.128-201ENST00000363391 112 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.135-201ENST00000363439 95 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RNU6-715P-201ENST00000365204 103 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RNU6-43P-201ENST00000384302 107 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 SNORD116-29-201ENST00000384516 83 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 MIR183-201ENST00000384958 110 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RNA5SP219-201ENST00000390940 113 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 CISD1P1-201ENST00000393907 327 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RNU4-14P-201ENST00000410858 122 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RNA5SP111-201ENST00000411386 101 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RPL37P10-201ENST00000412884 288 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RPS29P4-201ENST00000414733 161 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC080125.1-201ENST00000414888 684 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AL139396.1-201ENST00000421137 167 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RPL23AP69-201ENST00000431134 458 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 FABP5P14-201ENST00000437273 393 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RPL21P23-201ENST00000446654 460 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 MTND4P19-201ENST00000446659 478 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 MTND1P17-201ENST00000448961 204 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC006539.3-201ENST00000454258 129 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 HSPE1P6-201ENST00000479457 291 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 MTND5P5-201ENST00000503764 376 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RPL39P5-202ENST00000512505 151 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 SNORA14.1-201ENST00000516113 141 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 RNU6-1069P-201ENST00000516612 133 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC020661.2-201ENST00000560114 134 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC007151.1-201ENST00000572774 483 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC005951.2-201ENST00000576282 495 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 KLKP1-201ENST00000595979 403 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 DPPA3P3-201ENST00000603842 430 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AP001330.4-201ENST00000604350 154 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC008962.1-201ENST00000605729 304 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AL138726.1-201ENST00000614873 333 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AC090971.5-201ENST00000621102 293 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 AP003355.3-201ENST00000623465 114 ntBASIC3.62□□□□□ -1.83
DKK3Q9UBP4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
DKK3Q9UBP4 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC002546.1-201ENST00000588041 2504 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 SNORD116-11-201ENST00000383882 92 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 Y_RNA.579-201ENST00000390939 94 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 MIR548F5-201ENST00000408421 86 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RPS12P24-201ENST00000412619 387 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC092809.3-201ENST00000415453 231 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RPLP0P7-201ENST00000416050 667 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AL160275.3-201ENST00000423876 471 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RBMY2UP-201ENST00000453474 324 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RPL37P6-201ENST00000460682 294 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC087588.1-201ENST00000462203 316 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RPL32P34-201ENST00000486380 400 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 RNU6-927P-201ENST00000516199 100 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 CYCSP27-201ENST00000527643 293 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AL355836.1-201ENST00000555951 870 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AL670379.10-201ENST00000604330 253 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC006077.1-201ENST00000604746 343 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AL670379.9-201ENST00000605428 253 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC022893.3-201ENST00000607665 437 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC034102.8-201ENST00000615146 484 ntBASIC3.61□□□□□ -1.83
DKK3Q9UBP4 AC022418.1-201ENST00000624118 445 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms