Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.54□□□□□ -1.68
USP35Q9P2H5 RMST_4.1-201ENST00000616886 107 ntBASIC4.54□□□□□ -1.68
USP35Q9P2H5 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP35Q9P2H5 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP35Q9P2H5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
USP35Q9P2H5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 ASNSP3-201ENST00000451989 1306 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 MIR30E-201ENST00000362104 92 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 RNU6-1179P-201ENST00000384667 107 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP35Q9P2H5 AL592114.1-201ENST00000403842 483 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 MIR548F1-201ENST00000408667 84 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 AC110794.1-201ENST00000505816 425 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 RNU4-29P-201ENST00000515943 174 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 LINC00933-203ENST00000559812 219 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.53□□□□□ -1.68
USP35Q9P2H5 AC107294.3-201ENST00000609211 526 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 uc_338.34-201ENST00000617467 174 ntBASIC4.53□□□□□ -1.68
USP35Q9P2H5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP35Q9P2H5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP35Q9P2H5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP35Q9P2H5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 AL356057.2-201ENST00000403318 432 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 AL138885.1-201ENST00000405921 675 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 AC023141.4-201ENST00000412031 328 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 SNRPEP10-201ENST00000420249 274 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 RPS15AP27-201ENST00000449183 343 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 AL583843.1-201ENST00000456070 346 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 RPL38P4-201ENST00000502376 214 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 RNA5SP401-201ENST00000515920 127 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 RNA5SP380-201ENST00000517190 98 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 AC021739.1-201ENST00000559631 174 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 LRRC37A5P-203ENST00000580181 585 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 DISC2.1-201ENST00000612827 205 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 MIR6134-201ENST00000617606 109 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 AC022418.1-201ENST00000624118 445 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 MIR3688-2-201ENST00000636963 87 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP35Q9P2H5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 MTND5P27-201ENST00000428871 1720 ntBASIC4.52□□□□□ -1.69
USP35Q9P2H5 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC4.52□□□□□ -1.69
USP35Q9P2H5 AL079305.1-201ENST00000623159 3008 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.51□□□□□ -1.69
USP35Q9P2H5 RNY3P3-201ENST00000363816 102 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
USP35Q9P2H5 Z98749.2-208ENST00000381646 500 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 SNORD37.1-201ENST00000390968 65 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 SNORD70.1-201ENST00000391007 85 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 RNU6-607P-201ENST00000411283 108 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC096649.2-201ENST00000416186 393 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.51□□□□□ -1.69
USP35Q9P2H5 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC068657.1-201ENST00000520807 306 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC073539.2-201ENST00000597113 165 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 RPL12P50-201ENST00000603116 116 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC087045.1-201ENST00000605856 382 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC110079.1-202ENST00000635213 138 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 MIR3199-2-201ENST00000636243 86 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.51□□□□□ -1.69
USP35Q9P2H5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
USP35Q9P2H5 AC099654.7-201ENST00000635788 2127 ntBASIC4.51□□□□□ -1.69
USP35Q9P2H5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
USP35Q9P2H5 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP35Q9P2H5 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
USP35Q9P2H5 MIR449A-201ENST00000362113 91 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 SNORD14B-201ENST00000364533 90 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 MIR767-201ENST00000390228 109 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 RNA5SP354-201ENST00000391247 136 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 RPL35AP12-201ENST00000425362 338 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 GTF2IP20-201ENST00000431663 360 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 CALM1P1-201ENST00000442082 433 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.5□□□□□ -1.69
USP35Q9P2H5 AL121769.1-201ENST00000469473 401 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 AC092185.1-201ENST00000491371 97 ntBASIC4.5□□□□□ -1.69
USP35Q9P2H5 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms