Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.17□□□□□ -2.38
CHD7Q9P2D1 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.17□□□□□ -2.38
CHD7Q9P2D1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 AL121578.1-201ENST00000428051 892 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.16□□□□□ -2.38
CHD7Q9P2D1 AC099513.1-201ENST00000490423 301 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 MTATP6P22-201ENST00000507369 598 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 RNA5SP404-201ENST00000517118 132 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC0.16□□□□□ -2.38
CHD7Q9P2D1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
CHD7Q9P2D1 RNU6-272P-201ENST00000411028 104 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.16□□□□□ -2.38
CHD7Q9P2D1 RPL31P20-201ENST00000449593 360 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
CHD7Q9P2D1 AC021171.1-201ENST00000603137 706 ntBASIC0.16□□□□□ -2.38
CHD7Q9P2D1 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.38
CHD7Q9P2D1 SNORA4.1-201ENST00000364263 144 ntBASIC0.15□□□□□ -2.38
CHD7Q9P2D1 AL356320.2-201ENST00000417263 507 ntBASIC0.15□□□□□ -2.38
CHD7Q9P2D1 AC097499.1-201ENST00000444277 208 ntBASIC0.15□□□□□ -2.38
CHD7Q9P2D1 ARPC3P5-201ENST00000448802 534 ntBASIC0.15□□□□□ -2.38
CHD7Q9P2D1 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.15□□□□□ -2.38
CHD7Q9P2D1 MIR4645-201ENST00000583158 77 ntBASIC0.15□□□□□ -2.38
CHD7Q9P2D1 MTCO2P2-201ENST00000591258 225 ntBASIC0.15□□□□□ -2.38
CHD7Q9P2D1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.15□□□□□ -2.38
CHD7Q9P2D1 GDI2P1-201ENST00000429312 1336 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 RNU2-64P-201ENST00000411315 191 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.15□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.659-201ENST00000515994 113 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 AC093027.1-201ENST00000546698 429 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 MIR4667-201ENST00000578933 66 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 AL355816.1-201ENST00000607951 118 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.15□□□□□ -2.39
CHD7Q9P2D1 AC092192.1-201ENST00000633154 1018 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 RNA5SP212-201ENST00000391223 107 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 CR769776.1-201ENST00000441254 787 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 OR52A4P-202ENST00000481634 799 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.15□□□□□ -2.39
CHD7Q9P2D1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.15□□□□□ -2.39
CHD7Q9P2D1 AC090115.3-201ENST00000553218 849 ntBASIC0.15□□□□□ -2.39
CHD7Q9P2D1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.14□□□□□ -2.39
CHD7Q9P2D1 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 RPL23AP54-201ENST00000495129 419 ntBASIC0.14□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.654-201ENST00000497848 106 ntBASIC0.14□□□□□ -2.39
CHD7Q9P2D1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.14□□□□□ -2.39
CHD7Q9P2D1 HSPE1P7-201ENST00000604681 321 ntBASIC0.14□□□□□ -2.39
CHD7Q9P2D1 AC067838.1-201ENST00000606064 577 ntBASIC0.14□□□□□ -2.39
CHD7Q9P2D1 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AL138880.1-201ENST00000405824 642 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AC096920.1-201ENST00000423991 241 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AC092634.2-201ENST00000428146 1010 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 RPL37P21-201ENST00000435890 276 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 HSPE1P13-201ENST00000451143 297 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 MTND1P16-201ENST00000465177 898 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.13□□□□□ -2.39
CHD7Q9P2D1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.13□□□□□ -2.39
CHD7Q9P2D1 MIR4305-201ENST00000583252 102 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 RSL24D1P11-201ENST00000591045 491 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AC073410.2-201ENST00000603240 332 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 RNA5SP98-201ENST00000363158 137 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.413-201ENST00000384007 102 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.13□□□□□ -2.39
CHD7Q9P2D1 RPL31P3-201ENST00000458430 332 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.754-201ENST00000476024 102 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AC015908.1-201ENST00000478739 476 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 SCARNA16.2-201ENST00000516520 172 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 AC015849.6-201ENST00000605454 474 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.790-201ENST00000614282 102 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.782-201ENST00000614695 102 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 FRG1HP-204ENST00000617940 757 ntBASIC0.13□□□□□ -2.39
CHD7Q9P2D1 SNORA68.1-201ENST00000364537 132 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 RNU4-9P-201ENST00000364951 139 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.453-201ENST00000384223 109 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 RPL36AP53-201ENST00000432891 316 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 snoU13.11-201ENST00000459219 104 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AL161629.2-201ENST00000615347 275 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AL590410.1-201ENST00000617925 333 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AL512506.2-201ENST00000624472 458 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 Y_RNA.67-201ENST00000362870 100 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AL589655.1-201ENST00000405398 482 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 HMGN2P22-201ENST00000427588 175 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 MTCO1P53-201ENST00000441633 699 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC114982.1-201ENST00000469402 321 ntBASIC0.12□□□□□ -2.39
CHD7Q9P2D1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.12□□□□□ -2.39
CHD7Q9P2D1 AC141557.1-201ENST00000540982 400 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms