Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC010265.1-201ENST00000513509 211 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 AC078814.3-201ENST00000553036 491 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 AL133393.1-201ENST00000603277 287 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.3□□□□□ -1.88
LRFN1Q9P244 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
LRFN1Q9P244 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
LRFN1Q9P244 AC099654.7-201ENST00000635788 2127 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 RNU6-522P-201ENST00000364497 107 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 RNU6-867P-201ENST00000364956 107 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 RNU6-72P-201ENST00000384285 79 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 U3.37-201ENST00000408528 213 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 BX510359.1-201ENST00000456973 237 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 SNORA59A-201ENST00000459326 152 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 RNU6-1208P-201ENST00000459588 107 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 MTND4LP22-201ENST00000508209 276 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 SNORA25.17-201ENST00000517184 124 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC005498.1-201ENST00000592125 465 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 Z82243.1-201ENST00000609432 473 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC022306.2-201ENST00000617563 647 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC103705.1-201ENST00000619013 241 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC002064.3-201ENST00000623448 346 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AP003355.3-201ENST00000623465 114 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 MIR3662-201ENST00000637030 95 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 AC099654.14-201ENST00000638599 341 ntBASIC3.29□□□□□ -1.88
LRFN1Q9P244 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN1Q9P244 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.29□□□□□ -1.88
LRFN1Q9P244 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LRFN1Q9P244 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 RNU1-18P-201ENST00000363062 164 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 Y_RNA.324-201ENST00000365165 102 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 Y_RNA.378-201ENST00000365652 113 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 EI24P2-201ENST00000397776 1076 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN1Q9P244 RAP1BP3-201ENST00000407180 549 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 POLHP1-201ENST00000411806 470 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 RPLP0P7-201ENST00000416050 667 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC016831.2-201ENST00000417179 352 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 NDUFB1P1-201ENST00000435191 180 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 NIPA2P5-201ENST00000452282 464 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 HIGD1AP13-201ENST00000509878 289 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 RNU6-189P-201ENST00000516120 101 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC118273.2-201ENST00000532092 465 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 VN1R80P-201ENST00000597126 338 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC006077.1-201ENST00000604746 343 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC005000.2-201ENST00000605468 310 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC092807.2-201ENST00000609367 243 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 SCARNA4-202ENST00000625402 129 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.28□□□□□ -1.88
LRFN1Q9P244 AP003122.5-201ENST00000527668 3766 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 AC010889.1-201ENST00000566193 2666 ntBASIC3.28□□□□□ -1.88
LRFN1Q9P244 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN1Q9P244 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN1Q9P244 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LRFN1Q9P244 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
LRFN1Q9P244 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
LRFN1Q9P244 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LRFN1Q9P244 AC121333.1-201ENST00000567488 2709 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LRFN1Q9P244 Y_RNA.167-201ENST00000363735 109 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 U3.12-201ENST00000364498 214 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 RNU1-100P-201ENST00000365255 165 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 HMGN2P8-201ENST00000391458 268 ntBASIC3.27□□□□□ -1.89
LRFN1Q9P244 FGF7P8-201ENST00000402994 292 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms