Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC119674.1-207ENST00000641355 633 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AL359693.1-201ENST00000614959 2407 ntBASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
KCMF1Q9P0J7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC106871.1-201ENST00000568324 3102 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 RNU1-115P-201ENST00000365329 160 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 RNU6-596P-201ENST00000365395 98 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 RNU6-166P-201ENST00000384371 107 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC011742.1-201ENST00000431448 434 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 RPS15AP10-201ENST00000432472 382 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 SNRPEP9-201ENST00000436794 238 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC083863.1-201ENST00000438811 231 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AL078601.1-201ENST00000444542 271 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC092798.1-201ENST00000458542 409 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC128713.1-201ENST00000471495 306 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 HMGN2P13-201ENST00000476476 274 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 COX6CP5-201ENST00000527162 228 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 CBX3P8-201ENST00000532412 525 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC008269.2-201ENST00000561915 1105 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 MIR4286-201ENST00000580651 93 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AL645944.1-201ENST00000603857 493 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC009314.1-201ENST00000603871 304 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AL161629.2-201ENST00000615347 275 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC103858.2-201ENST00000621471 543 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 FP236240.3-201ENST00000623061 327 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AC099506.2-201ENST00000623074 221 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 MTND5P1-201ENST00000445440 1375 ntBASIC3.76□□□□□ -1.81
KCMF1Q9P0J7 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC005592.1-201ENST00000566527 1640 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RNU6-50P-201ENST00000362356 103 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.80-201ENST00000362996 102 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.314-201ENST00000365114 102 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RNU1-64P-201ENST00000365443 163 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.485-201ENST00000384395 102 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 Y_RNA.557-201ENST00000384680 107 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 MIR34A-201ENST00000385130 110 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 Z98941.1-201ENST00000407764 100 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RNA5SP129-201ENST00000410276 118 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AL691449.1-201ENST00000426570 421 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RPL7P2-201ENST00000427639 268 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC092573.2-201ENST00000434546 243 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC099799.1-201ENST00000439809 192 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 IPO7P1-201ENST00000442031 636 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC022447.4-201ENST00000504053 364 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC105758.1-201ENST00000506038 399 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RN7SKP289-201ENST00000517244 295 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC103996.1-201ENST00000555468 102 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 HSPE1P5-201ENST00000561489 272 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 CPDP1-201ENST00000579660 283 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AP000787.2-201ENST00000604432 568 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 U6.99-201ENST00000637524 83 ntBASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
KCMF1Q9P0J7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
KCMF1Q9P0J7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms