Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
VSX1Q9NZR4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 RNU1-115P-201ENST00000365329 160 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 MIR199A2-201ENST00000385289 110 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 HMGN2P8-201ENST00000391458 268 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 C4BPAP2-201ENST00000428434 478 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 TBCAP1-201ENST00000436520 327 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 SNRPEP9-201ENST00000436794 238 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 HMGB1P12-201ENST00000438594 598 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 CECR9-201ENST00000453421 199 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AC006026.2-201ENST00000457376 180 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 RPL21P11-201ENST00000461458 483 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 RPL23AP14-201ENST00000468281 468 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 ACA59.1-201ENST00000515966 143 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 RNA5SP165-201ENST00000517142 115 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 RN7SKP295-201ENST00000517264 153 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 HSPE1P5-201ENST00000561489 272 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AL590392.1-201ENST00000604960 446 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 MIR492-201ENST00000638676 116 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.47□□□□□ -1.85
VSX1Q9NZR4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.47□□□□□ -1.85
VSX1Q9NZR4 AL672296.1-201ENST00000427780 2158 ntBASIC3.46□□□□□ -1.85
VSX1Q9NZR4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.5-201ENST00000362334 102 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.132-201ENST00000363421 102 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 SNORD14B-201ENST00000364533 90 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 RNU6-1032P-201ENST00000384100 107 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.463-201ENST00000384271 102 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 CRYBB2P1-203ENST00000415709 538 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AL356095.1-201ENST00000417217 199 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 SYF2P2-201ENST00000417620 583 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC098614.2-201ENST00000426040 255 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AL691449.1-201ENST00000426570 421 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 USP9YP30-201ENST00000430729 455 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC099799.1-201ENST00000439809 192 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 HMGB3P8-201ENST00000449709 577 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 RNU7-187P-201ENST00000458985 68 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 RPS4XP13-201ENST00000483219 789 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 RNA5SP143-201ENST00000516936 115 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC025755.1-201ENST00000521306 278 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 IGHV3-76-201ENST00000522465 295 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 MIR6716-201ENST00000613413 80 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AC008121.3-201ENST00000618726 433 ntBASIC3.46□□□□□ -1.86
VSX1Q9NZR4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.46□□□□□ -1.86
VSX1Q9NZR4 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.80-201ENST00000362996 102 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.216-201ENST00000364205 93 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 RNU6-384P-201ENST00000364900 104 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.404-201ENST00000383978 102 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 Y_RNA.428-201ENST00000384078 102 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 RNU4-6P-201ENST00000410804 122 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AL592148.1-201ENST00000413568 445 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AC011816.1-201ENST00000441346 546 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AL078601.1-201ENST00000444542 271 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 U8.21-201ENST00000459536 136 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 RN7SL93P-201ENST00000463035 293 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AC084357.1-201ENST00000473404 255 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 RPL7P42-201ENST00000481005 679 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AC018437.1-201ENST00000492214 406 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AC015911.1-201ENST00000495111 156 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.45□□□□□ -1.86
VSX1Q9NZR4 RNU6-1213P-201ENST00000517075 94 ntBASIC3.45□□□□□ -1.86
VSX1Q9NZR4 SNORD116.3-201ENST00000517176 78 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms