Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 RPL32P3-201ENST00000359025 275 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.67-201ENST00000362870 100 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 RNA5SP97-201ENST00000365006 84 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.387-201ENST00000383918 102 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 RNU6-198P-201ENST00000384258 104 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 FABP5P14-201ENST00000437273 393 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 H2AFZP6-201ENST00000444403 394 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 BTF3P15-201ENST00000455606 336 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC034236.1-201ENST00000469891 373 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 RPL23AP45-201ENST00000476406 468 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 PHBP14-201ENST00000512887 367 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC104576.1-201ENST00000524225 88 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AL451007.1-201ENST00000595491 289 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC016727.1-205ENST00000605437 569 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC064836.2-201ENST00000609491 462 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 SCARNA4-202ENST00000625402 129 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 AL732372.2-225ENST00000642124 456 ntBASIC3.7□□□□□ -1.82
MKS1Q9NXB0 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
MKS1Q9NXB0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 MFSD8-236ENST00000641509 4050 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.58-201ENST00000362807 102 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.154-201ENST00000363624 102 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 RNY3P1-201ENST00000365085 102 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 RNY3-201ENST00000365484 102 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 Y_RNA.490-201ENST00000384413 102 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 SAR1AP2-201ENST00000392696 594 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AL445529.1-201ENST00000398713 389 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 RNU4-14P-201ENST00000410858 122 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC093151.1-201ENST00000427711 313 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AL645568.3-201ENST00000433683 316 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 HIGD1AP11-201ENST00000438361 280 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC068587.1-201ENST00000483613 781 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 GLYCAM1-201ENST00000546596 285 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC024220.1-201ENST00000603675 484 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 RNU4-89P-201ENST00000607443 133 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AL161629.2-201ENST00000615347 275 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC022140.2-201ENST00000623500 188 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
MKS1Q9NXB0 FAM35CP-201ENST00000554755 2470 ntBASIC3.69□□□□□ -1.82
MKS1Q9NXB0 AC092435.3-201ENST00000565538 3654 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 RNU6-694P-201ENST00000364071 147 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 MTND4P28-201ENST00000426217 387 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC005300.1-201ENST00000428401 373 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 HMGN2P10-201ENST00000448085 265 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC113155.1-201ENST00000511141 769 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 SNORD59.2-201ENST00000516873 68 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 RNU6-579P-201ENST00000516879 102 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC109479.2-201ENST00000517842 174 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 IMMP1LP2-201ENST00000552954 492 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.68□□□□□ -1.82
MKS1Q9NXB0 GABRG2-229ENST00000641017 3628 ntBASIC3.68□□□□□ -1.82
MKS1Q9NXB0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AL356095.1-201ENST00000417217 199 ntBASIC3.67□□□□□ -1.82
MKS1Q9NXB0 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.67□□□□□ -1.82
MKS1Q9NXB0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms