Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCM2LQ9NUG4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.73□□□□□ -1.81
CCM2LQ9NUG4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCM2LQ9NUG4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 RNU6-270P-201ENST00000364131 105 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 XGY1-201ENST00000381172 446 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 SNORD116-29-201ENST00000384516 83 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 MIR449B-201ENST00000384995 97 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC108032.1-201ENST00000416706 207 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL159987.2-201ENST00000432754 307 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC083863.1-201ENST00000438811 231 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL031274.1-201ENST00000450334 232 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 SSXP4-201ENST00000451349 245 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 PRSS3P4-201ENST00000453323 162 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 BTF3P15-201ENST00000455606 336 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 NACAP3-201ENST00000552100 481 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 CYCSP39-201ENST00000565821 309 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 MIR5690-201ENST00000583739 73 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL353621.2-201ENST00000605340 133 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL161423.1-201ENST00000613700 262 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL161629.2-201ENST00000615347 275 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AL138880.2-201ENST00000616214 239 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC068831.7-201ENST00000616954 363 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC091953.5-201ENST00000622919 233 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 MTND4LP32-201ENST00000636111 270 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 AC066616.2-201ENST00000559334 1481 ntBASIC3.72□□□□□ -1.81
CCM2LQ9NUG4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCM2LQ9NUG4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCM2LQ9NUG4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MAPK10-372ENST00000641954 3413 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 SNORA60-201ENST00000362396 134 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 Y_RNA.419-201ENST00000384041 102 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 RNU6-72P-201ENST00000384285 79 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MIR1302-11-201ENST00000408051 138 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MIR1302-9-201ENST00000408365 138 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MIR1302-10-201ENST00000408734 138 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 SNORD56-201ENST00000413522 71 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 COX6B1P7-201ENST00000430845 235 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AL445584.1-201ENST00000431451 330 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 RPS15AP10-201ENST00000432472 382 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AC007677.1-201ENST00000445757 515 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AC006026.2-201ENST00000457376 180 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AC113155.1-201ENST00000511141 769 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 TRMT10BP1-201ENST00000519377 943 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AP004607.1-201ENST00000524456 203 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 APOOP3-201ENST00000536787 586 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 LINC00933-203ENST00000559812 219 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AL161729.3-201ENST00000603533 673 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AL160281.1-201ENST00000605307 311 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 MIR1302-2-201ENST00000607096 138 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AL133215.3-201ENST00000609801 448 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AC098657.3-201ENST00000620434 263 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
CCM2LQ9NUG4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 RNU6-1188P-201ENST00000363795 107 ntBASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 SNORD6-201ENST00000365444 73 ntBASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 MIR7-3-201ENST00000384898 110 ntBASIC3.7□□□□□ -1.82
CCM2LQ9NUG4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms