Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC135721.1-201ENST00000497954 479 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 AC093852.1-201ENST00000503587 266 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
ATG3Q9NT62 SCARNA13-201ENST00000516672 275 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 AC007458.1-201ENST00000542812 373 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 U6.104-201ENST00000637979 90 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.92□□□□□ -1.62
ATG3Q9NT62 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG3Q9NT62 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG3Q9NT62 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
ATG3Q9NT62 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
ATG3Q9NT62 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ATG3Q9NT62 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 RNU6-946P-201ENST00000383878 107 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 MIR490-201ENST00000384865 128 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 RPL23AP48-201ENST00000406913 488 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 RNU2-33P-201ENST00000410344 192 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 BX276092.3-201ENST00000424182 230 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 CALM2P2-201ENST00000428512 440 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 AL359672.1-201ENST00000442302 409 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 SNORD97-201ENST00000459187 142 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 TRBVB-201ENST00000477100 408 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 RPL23AP55-201ENST00000498163 452 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 MIR5195-201ENST00000583555 115 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 AL160281.1-201ENST00000605307 311 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 MIR4727-201ENST00000622232 55 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 AC027287.1-201ENST00000553115 1453 ntBASIC4.91□□□□□ -1.62
ATG3Q9NT62 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.91□□□□□ -1.62
ATG3Q9NT62 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.9□□□□□ -1.62
ATG3Q9NT62 AC138393.1-203ENST00000327086 343 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 Y_RNA.48-201ENST00000362710 103 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RNU6-280P-201ENST00000364145 104 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RNU6-662P-201ENST00000384253 104 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RNU6-434P-201ENST00000384376 107 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RNU6-125P-201ENST00000384505 107 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 MIR218-2-201ENST00000385006 110 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RNU6-121P-201ENST00000410525 99 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RNU2-15P-201ENST00000410692 191 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RPL21P38-201ENST00000418090 167 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL133396.1-201ENST00000432048 687 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL353997.1-201ENST00000432936 108 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL031274.1-201ENST00000450334 232 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 AC084198.1-201ENST00000477747 402 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AP003733.2-201ENST00000529409 171 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AC109446.1-201ENST00000566172 220 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL138889.2-201ENST00000603883 242 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 HMGN2P28-201ENST00000606102 262 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL773545.4-201ENST00000637262 310 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 AC132825.6-201ENST00000638861 357 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 AL513478.4-201ENST00000641636 310 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG3Q9NT62 EXOC5P1-201ENST00000510543 1969 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG3Q9NT62 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 ANKRD36BP1-201ENST00000358576 1779 ntBASIC4.9□□□□□ -1.63
ATG3Q9NT62 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
ATG3Q9NT62 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
ATG3Q9NT62 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG3Q9NT62 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 MFSD8-236ENST00000641509 4050 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 Y_RNA.297-201ENST00000364950 91 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 SNORD113-1-201ENST00000365321 69 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ATG3Q9NT62 Y_RNA.577-201ENST00000384794 101 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 MIR517A-201ENST00000385001 87 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 AL138885.1-201ENST00000405921 675 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 RPS4XP7-201ENST00000406274 780 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 RPS3AP46-201ENST00000448352 682 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 RPS17P13-201ENST00000448974 407 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 PCMTD1P1-201ENST00000455560 355 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC098869.1-201ENST00000481627 292 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 RPS26P15-201ENST00000488067 348 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 RPL17P19-201ENST00000489069 552 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 COX7A2P2-201ENST00000505291 250 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.89□□□□□ -1.63
ATG3Q9NT62 RNA5SP164-201ENST00000516533 110 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 RNU5B-3P-201ENST00000516601 115 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 SNORA40.15-201ENST00000516884 107 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC006600.1-201ENST00000572529 153 ntBASIC4.89□□□□□ -1.63
ATG3Q9NT62 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms