Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 BX276092.3-201ENST00000424182 230 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 RPL21P2-201ENST00000440049 481 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC069285.2-201ENST00000440210 275 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 RANP8-201ENST00000444720 713 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC115115.1-201ENST00000449927 248 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 RPL21P11-201ENST00000461458 483 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 RN7SKP57-201ENST00000517248 293 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC022616.4-201ENST00000522985 181 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 OR5D17P-201ENST00000531492 978 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC022882.1-201ENST00000532142 501 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC005357.1-201ENST00000588399 301 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AL360181.4-201ENST00000621752 134 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 AC018529.3-201ENST00000624212 2254 ntBASIC4.29□□□□□ -1.72
PDLIM7Q9NR12 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.106-201ENST00000363189 100 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.152-201ENST00000363578 100 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 RNA5SP51-201ENST00000364750 119 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 Y_RNA.396-201ENST00000383949 103 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AL445529.1-201ENST00000398713 389 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 RNA5SP306-201ENST00000411087 107 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AL133396.1-201ENST00000432048 687 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AC107222.1-201ENST00000510899 637 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 OR1M4P-201ENST00000589199 287 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 BDH2P1-201ENST00000602288 736 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AL021879.1-201ENST00000611756 288 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 ZNF962P-201ENST00000443465 3140 ntBASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.28□□□□□ -1.72
PDLIM7Q9NR12 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
PDLIM7Q9NR12 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 UBE3AP2-201ENST00000429033 2259 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 RNU6-600P-201ENST00000362524 99 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.48-201ENST00000362710 103 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 SNORD14.1-201ENST00000365609 90 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 DEFB109C-201ENST00000382575 264 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 DEFB109B-201ENST00000382656 264 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.534-201ENST00000384599 112 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AC063979.1-201ENST00000415539 377 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 RPS15AP10-201ENST00000432472 382 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AL353997.1-201ENST00000432936 108 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 VDAC1P3-201ENST00000434069 851 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 DYNLT3P2-201ENST00000442517 295 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AL031274.1-201ENST00000450334 232 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 CHEK2P4-201ENST00000450340 246 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 RPS23P3-201ENST00000470993 430 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AC011005.2-201ENST00000487324 359 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 VN1R104P-201ENST00000505115 1009 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 RNY3P15-201ENST00000516297 97 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 MIR548AC-201ENST00000585049 88 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 RNU1-30P-201ENST00000606575 163 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AL353748.2-201ENST00000622148 471 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 ZNF72P-201ENST00000425869 1908 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 AL079305.1-201ENST00000623159 3008 ntBASIC4.27□□□□□ -1.73
PDLIM7Q9NR12 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 Y_RNA.257-201ENST00000364596 102 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 RNU6-790P-201ENST00000384479 105 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 MIR490-201ENST00000384865 128 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 SNORA48.2-201ENST00000390926 124 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 MIR1252-201ENST00000408861 65 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 AL030996.1-201ENST00000411430 235 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 CYCSP33-201ENST00000414485 327 ntBASIC4.26□□□□□ -1.73
PDLIM7Q9NR12 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms