Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 FO082796.1-201ENST00000523795 183 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 RANP3-201ENST00000530970 276 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 OR5B19P-201ENST00000531766 928 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 ADI1P3-201ENST00000549509 470 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 MIR4775-201ENST00000581168 75 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 MIR3945-201ENST00000581853 98 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC013553.2-201ENST00000604244 589 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AP001596.2-201ENST00000608410 312 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC012409.4-201ENST00000612923 249 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 MIR6817-201ENST00000615588 66 ntBASIC3.22□□□□□ -1.89
DDX4Q9NQI0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.22□□□□□ -1.89
DDX4Q9NQI0 AC233263.6-201ENST00000631132 1963 ntBASIC3.21□□□□□ -1.89
DDX4Q9NQI0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
DDX4Q9NQI0 ASNSP3-201ENST00000451989 1306 ntBASIC3.21□□□□□ -1.89
DDX4Q9NQI0 RNU6-799P-201ENST00000363567 107 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.453-201ENST00000384223 109 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 RNU6-780P-201ENST00000391030 104 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 SNORD115-47-201ENST00000391226 86 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC068050.1-201ENST00000394891 380 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 RNU2-29P-201ENST00000410423 189 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC114491.1-201ENST00000416095 246 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 MTCO1P20-201ENST00000425366 358 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 FABP5P13-201ENST00000452144 328 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 RNU6-420P-201ENST00000458780 107 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC006512.1-201ENST00000468816 291 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AL160314.1-201ENST00000490836 438 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 RNA5SP148-201ENST00000516527 94 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AL020991.1-201ENST00000612314 373 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
DDX4Q9NQI0 AC007785.2-201ENST00000598627 1916 ntBASIC3.21□□□□□ -1.9
DDX4Q9NQI0 CKAP2P1-201ENST00000555477 2049 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC006020.1-201ENST00000420179 1854 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC022336.2-201ENST00000568966 2538 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 RNA5SP139-201ENST00000364340 117 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 Y_RNA.255-201ENST00000364581 97 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 RNU6-483P-201ENST00000384088 108 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 RNU6-1029P-201ENST00000384109 107 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 SNORA67.4-201ENST00000384688 142 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC009963.1-201ENST00000417265 157 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 MYL8P-204ENST00000431574 518 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AL591212.2-201ENST00000433923 257 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AL596276.1-201ENST00000434465 418 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 Z82210.1-201ENST00000440037 231 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 CALM1P1-201ENST00000442082 433 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 DPPA3P1-201ENST00000448050 469 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 MTND1P18-201ENST00000448191 573 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 RPS29P15-201ENST00000458329 171 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AL163973.1-201ENST00000484753 577 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 RPL39P36-201ENST00000490784 156 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC098591.2-201ENST00000510152 315 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 TRAV28-201ENST00000557548 323 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC027176.1-201ENST00000560204 514 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 MIR4801-201ENST00000582704 82 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC104458.1-201ENST00000608243 463 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC005046.1-201ENST00000608515 625 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC007014.2-201ENST00000615581 479 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC010338.1-201ENST00000621823 717 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 FER-210ENST00000628534 558 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 MTND1P37-201ENST00000636562 264 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 AC004944.1-201ENST00000517807 3059 ntBASIC3.2□□□□□ -1.9
DDX4Q9NQI0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
DDX4Q9NQI0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
DDX4Q9NQI0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms