Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC110491.1-201ENST00000562191 2010 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 NACAP2-201ENST00000318548 624 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNU5E-1-201ENST00000362477 120 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 Y_RNA.169-201ENST00000363745 96 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 SNORA4.3-201ENST00000365564 137 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 Z98749.2-208ENST00000381646 500 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNU6-946P-201ENST00000383878 107 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL031577.2-201ENST00000404133 280 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 NDUFS5P4-201ENST00000412983 318 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 OR51A5P-201ENST00000415429 942 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 SEPT2P1-201ENST00000419651 180 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 USP9YP12-201ENST00000450481 570 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL139824.2-201ENST00000458731 1095 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL049873.1-201ENST00000480540 376 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RPL39P36-201ENST00000490784 156 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNU6-581P-201ENST00000516214 105 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNU6-703P-201ENST00000516946 107 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNU6-1092P-201ENST00000516955 87 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 RNU6-1220P-201ENST00000517126 108 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC009902.1-201ENST00000519351 183 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 OR5B19P-201ENST00000531766 928 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC021739.1-201ENST00000559631 174 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC005332.10-201ENST00000612725 619 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC025594.3-201ENST00000613068 790 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AL162373.1-201ENST00000620433 407 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 AC120349.3-201ENST00000624377 529 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 PISRT1-201ENST00000626175 531 ntBASIC1.88□□□□□ -2.11
HMG20AQ9NP66 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 RPL26P27-201ENST00000414397 437 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC114491.1-201ENST00000416095 246 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 RPL7P34-201ENST00000433316 712 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC098831.1-201ENST00000440661 216 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 TAF9P1-201ENST00000445421 515 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 HMGN2P10-201ENST00000448085 265 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 TAF9P2-201ENST00000454958 515 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC093899.1-201ENST00000457984 376 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 SNORD97-201ENST00000459187 142 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 RPL37P6-201ENST00000460682 294 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 TRBV1-201ENST00000476502 284 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC010486.2-201ENST00000505572 483 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC117522.2-201ENST00000510049 657 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 RNA5SP281-201ENST00000516504 135 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC106038.2-201ENST00000520706 568 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC060788.1-201ENST00000521318 469 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC006199.1-201ENST00000548728 219 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC104763.2-201ENST00000604179 382 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC112191.3-201ENST00000604371 277 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC007938.3-201ENST00000604965 623 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 RNU6-87P-201ENST00000607561 108 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC022893.3-201ENST00000607665 437 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC004520.1-201ENST00000608362 1413 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AL365204.3-201ENST00000612448 685 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AC009878.1-201ENST00000621819 340 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 AL512643.1-201ENST00000635735 524 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 MTND5P42-201ENST00000637720 498 ntBASIC1.87□□□□□ -2.11
HMG20AQ9NP66 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.87□□□□□ -2.11
HMG20AQ9NP66 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 SNORD56.2-201ENST00000363242 71 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 Y_RNA.534-201ENST00000384599 112 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AL109913.1-201ENST00000421173 514 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 MTND4P20-201ENST00000424125 869 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AL591212.2-201ENST00000433923 257 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 PSPHP1-201ENST00000450062 261 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 MTND1P12-201ENST00000455231 147 ntBASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.86□□□□□ -2.11
HMG20AQ9NP66 RAP1BP2-201ENST00000478270 544 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms