Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC245884.10-201ENST00000597355 337 ntBASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 AP002360.4-201ENST00000606980 481 ntBASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 AC016597.2-201ENST00000613256 341 ntBASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 AL359547.2-201ENST00000615810 418 ntBASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 AL078595.3-201ENST00000623815 1166 ntBASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 AC008555.8-201ENST00000623602 2168 ntBASIC1.51□□□□□ -2.17
SND1-IT1Q9HBX3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 SNORD114-19-201ENST00000363072 75 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 OR5H15-201ENST00000383696 930 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 MIR518C-201ENST00000384822 101 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 SNORA40.19-201ENST00000390846 128 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 HMGN2P39-201ENST00000398005 273 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 RPS15AP12-201ENST00000419498 388 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 RPL23AP30-201ENST00000432419 501 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 RPS15AP28-201ENST00000435088 386 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 RPL21P133-201ENST00000443666 476 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 Z73417.1-201ENST00000447373 778 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL583843.1-201ENST00000456070 346 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC020699.1-201ENST00000505161 445 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 RNA5SP24-201ENST00000516478 95 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AP004607.1-201ENST00000524456 203 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC021269.2-201ENST00000532318 330 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 PCMTD1P2-201ENST00000565017 355 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 SNORD53-201ENST00000579969 78 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 MIR3944-201ENST00000581277 108 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC073410.2-201ENST00000603240 332 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC007179.3-201ENST00000604976 235 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC018638.7-201ENST00000605836 1114 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL355816.2-201ENST00000610049 647 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC096577.2-201ENST00000611455 153 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC010378.1-201ENST00000619270 362 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 MIR6766-201ENST00000622641 72 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL031601.2-202ENST00000622650 282 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AL160394.1-201ENST00000624765 724 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 AC093591.3-201ENST00000634516 308 ntBASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.5□□□□□ -2.17
SND1-IT1Q9HBX3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNU6-501P-201ENST00000364072 100 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNU4-28P-201ENST00000364739 141 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 SNORA25B-201ENST00000365507 128 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 SNORA75B-201ENST00000384053 137 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNU6-533P-201ENST00000384144 107 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNU6-843P-201ENST00000384454 104 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNU1-57P-201ENST00000384491 166 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 Y_RNA.623-201ENST00000411128 95 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AL365338.1-201ENST00000422282 858 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 COTL1P1-201ENST00000422309 375 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC063976.3-201ENST00000426849 329 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AL627311.1-201ENST00000431514 115 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 KATNBL1P6-201ENST00000453433 915 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNU6-717P-201ENST00000459076 104 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 MTAPP1-201ENST00000489154 819 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 HMGB1P30-201ENST00000492455 606 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 MIR514B-201ENST00000516774 80 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 RNA5SP337-201ENST00000517007 109 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC034114.1-201ENST00000520293 285 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 MTND2P32-201ENST00000521584 1038 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 OR5B19P-201ENST00000531766 928 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 BNIP3P30-201ENST00000601184 574 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AL109918.3-201ENST00000603072 338 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AL138889.2-201ENST00000603883 242 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC007621.1-201ENST00000604544 437 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 OR2AS2P-201ENST00000606902 342 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC098614.4-201ENST00000607601 462 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AL442067.2-201ENST00000614033 363 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC024940.5-201ENST00000622889 474 ntBASIC1.49□□□□□ -2.17
SND1-IT1Q9HBX3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms