Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC025755.1-201ENST00000521306 278 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC104383.1-201ENST00000530297 370 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 MIR2682-201ENST00000580305 110 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 UBL5P2-201ENST00000583788 219 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 AC084782.3-201ENST00000612282 578 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 U6.42-201ENST00000618440 107 ntBASIC3.04□□□□□ -1.92
POLR1BQ9H9Y6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 OR4G2P-201ENST00000328113 903 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 RNU1-70P-201ENST00000362618 164 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-1158P-201ENST00000391167 107 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 RNA5SP354-201ENST00000391247 136 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC093151.1-201ENST00000427711 313 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AL162395.1-201ENST00000457882 422 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 RNU6-261P-201ENST00000459506 102 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 RPL9P33-201ENST00000484311 566 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AL163973.1-201ENST00000484753 577 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC104136.1-201ENST00000512969 394 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 LRRC34P2-201ENST00000514850 553 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 RN7SKP219-201ENST00000516825 296 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 SNORA31.19-201ENST00000517079 126 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC025281.1-201ENST00000567026 265 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 MIR4782-201ENST00000577987 79 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC008752.3-201ENST00000588113 712 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 U4.5-201ENST00000617137 123 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 CR381653.2-201ENST00000624041 768 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 U6.99-201ENST00000637524 83 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 MIR622-201ENST00000638396 96 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1BQ9H9Y6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
POLR1BQ9H9Y6 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 CKAP2P1-201ENST00000555477 2049 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-371P-201ENST00000364283 108 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNA5SP126-201ENST00000365092 109 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-996P-201ENST00000365438 107 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-116P-201ENST00000384042 109 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-1215P-201ENST00000384441 102 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-658P-201ENST00000384606 106 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 CALM2P3-201ENST00000400429 449 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 EEF1A1P40-201ENST00000412883 573 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AL139281.1-201ENST00000422120 335 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RPS15AP5-201ENST00000436276 388 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AL078601.1-201ENST00000444542 271 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RPS26P21-201ENST00000475397 348 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RPS29P20-201ENST00000489592 171 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC019235.1-201ENST00000503847 207 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC009646.1-201ENST00000510455 318 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC008716.1-201ENST00000511084 513 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.693-201ENST00000516641 110 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-572P-201ENST00000516724 80 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AP005435.4-201ENST00000529514 284 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC005498.1-201ENST00000592125 465 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AL645944.1-201ENST00000603857 493 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC068792.1-201ENST00000621354 417 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC091903.1-201ENST00000624322 454 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC110079.1-202ENST00000635213 138 ntBASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
POLR1BQ9H9Y6 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 MTND4P14-201ENST00000435799 1354 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC006020.1-201ENST00000420179 1854 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 MIR449A-201ENST00000362113 91 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.6-201ENST00000362350 114 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 Y_RNA.255-201ENST00000364581 97 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 MIR767-201ENST00000390228 109 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 RNU6-192P-201ENST00000391253 100 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 RN7SKP220-201ENST00000410611 288 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 RNA5SP344-201ENST00000411081 104 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 UBE2V1P10-201ENST00000414685 269 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AC096649.2-201ENST00000416186 393 ntBASIC3.01□□□□□ -1.93
POLR1BQ9H9Y6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms