Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AP000852.1-201ENST00000472460 573 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC117522.2-201ENST00000510049 657 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 RNA5SP291-201ENST00000517222 105 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AL391261.3-201ENST00000557194 520 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 MIR4528-201ENST00000577763 90 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 MIR4648-201ENST00000580107 72 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC004805.2-201ENST00000605382 482 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 AC110079.1-202ENST00000635213 138 ntBASIC2.51□□□□□ -2.01
RNF41Q9H4P4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
RNF41Q9H4P4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC092881.1-201ENST00000638218 2733 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 RNU6-946P-201ENST00000383878 107 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 FO393413.1-201ENST00000402892 195 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 RNU2-8P-201ENST00000410727 190 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC114491.1-201ENST00000416095 246 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 SKA2P1-201ENST00000425592 390 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC137499.1-201ENST00000427602 88 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 ISCA1P6-201ENST00000427740 390 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 SNRPEP9-201ENST00000436794 238 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC244505.5-201ENST00000443639 207 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 MTND1P29-201ENST00000448112 647 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 MTCYBP1-201ENST00000454315 1119 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC007182.2-201ENST00000489251 402 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 RPL39P36-201ENST00000490784 156 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC010424.1-201ENST00000506336 297 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC009901.1-201ENST00000506703 541 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC079140.3-201ENST00000511111 550 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 SCARNA24.1-201ENST00000516465 137 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 RNA5SP82-201ENST00000516707 92 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 SNORA18.6-201ENST00000516792 115 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 RNA5SP290-201ENST00000517133 127 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC090572.1-201ENST00000519251 160 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AP003072.2-201ENST00000527756 676 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AP002963.1-201ENST00000530590 184 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 OR5B19P-201ENST00000531766 928 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 MIR3913-1-201ENST00000577744 102 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC024619.4-201ENST00000580924 316 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 MIR3682-201ENST00000581338 84 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 RSL24D1P11-201ENST00000591045 491 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC104763.2-201ENST00000604179 382 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 AC011890.2-201ENST00000613393 294 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 MTND5P42-201ENST00000637720 498 ntBASIC2.5□□□□□ -2.01
RNF41Q9H4P4 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.5□□□□□ -2.01
RNF41Q9H4P4 MTND5P29-201ENST00000458676 1807 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNA5SP393-201ENST00000363423 117 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNU6-884P-201ENST00000363889 107 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 Y_RNA.534-201ENST00000384599 112 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 SNORA64-201ENST00000384674 134 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 MIR558-201ENST00000384920 94 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNU6-817P-201ENST00000391083 104 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RN7SKP32-201ENST00000410167 303 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNU2-25P-201ENST00000411041 191 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AC127391.1-201ENST00000411737 98 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RPS12P24-201ENST00000412619 387 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AC104651.1-201ENST00000427559 735 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 MTND4P32-201ENST00000437189 1237 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNU6-956P-201ENST00000458868 103 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNU7-23P-201ENST00000459465 62 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RPS29P20-201ENST00000489592 171 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.49□□□□□ -2.01
RNF41Q9H4P4 MTCO3P28-201ENST00000513351 515 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RNU7-51P-201ENST00000516560 62 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 Vault.3-201ENST00000516676 95 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL359212.1-201ENST00000556608 614 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AC040904.1-201ENST00000590850 223 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL136363.1-201ENST00000605349 337 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL121917.1-203ENST00000605534 577 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 RN7SKP299-201ENST00000606679 301 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 AL133173.2-201ENST00000614270 90 ntBASIC2.49□□□□□ -2.01
RNF41Q9H4P4 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms