Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RHEBP3-201ENST00000411920 351 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS11Q9H270 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS11Q9H270 AC245028.1-201ENST00000423259 256 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AC093106.2-201ENST00000428212 385 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS11Q9H270 HMGB1P37-201ENST00000439613 609 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS11Q9H270 NOTCH2P1-201ENST00000443481 624 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 RPL39P38-201ENST00000467018 153 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 RN7SL604P-201ENST00000492589 296 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS11Q9H270 RNU1-54P-201ENST00000517181 120 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS11Q9H270 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS11Q9H270 HSPE1P20-201ENST00000538133 289 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS11Q9H270 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS11Q9H270 RAC1P9-201ENST00000604990 392 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 MTND4LP5-201ENST00000605152 292 ntBASIC3.98□□□□□ -1.77
VPS11Q9H270 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VPS11Q9H270 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS11Q9H270 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS11Q9H270 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.97□□□□□ -1.77
VPS11Q9H270 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS11Q9H270 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
VPS11Q9H270 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
VPS11Q9H270 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS11Q9H270 MIR383-201ENST00000362257 73 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RNA5SP443-201ENST00000363083 132 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RNA5SP509-201ENST00000364577 119 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 Y_RNA.276-201ENST00000364732 109 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 Y_RNA.291-201ENST00000364886 113 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RNU5E-6P-201ENST00000365574 115 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RNU6-842P-201ENST00000384269 107 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 MIR493-201ENST00000385254 89 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 SNORA16.2-201ENST00000390991 127 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 PCNPP3-201ENST00000393579 471 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 HLFP1-201ENST00000402375 499 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 HSPE1P12-201ENST00000412576 301 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RPL30P2-201ENST00000414021 291 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 Z99755.1-201ENST00000414048 380 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS11Q9H270 AL590383.1-201ENST00000428602 75 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 AC087884.1-201ENST00000469738 328 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RN7SL303P-201ENST00000469773 251 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RPL31P60-201ENST00000478450 367 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RN7SL459P-201ENST00000481078 302 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 AC105758.1-201ENST00000506038 399 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS11Q9H270 RNU6-1332P-201ENST00000516666 104 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 RNU6-182P-201ENST00000516970 105 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 SNORA81.3-201ENST00000517283 198 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS11Q9H270 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS11Q9H270 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS11Q9H270 AC091516.1-201ENST00000549191 703 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 AL121576.1-201ENST00000556055 276 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 MIR5188-201ENST00000583467 113 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 AC234771.5-201ENST00000600161 514 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 MIR7151-201ENST00000617477 60 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 SDR42E1P4-201ENST00000620894 481 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 AP000346.3-201ENST00000622821 210 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 MIR4272-201ENST00000635924 64 ntBASIC3.97□□□□□ -1.77
VPS11Q9H270 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS11Q9H270 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.96□□□□□ -1.77
VPS11Q9H270 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS11Q9H270 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS11Q9H270 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
VPS11Q9H270 RNA5SP366-201ENST00000365454 123 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 Y_RNA.539-201ENST00000384635 107 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 SNORA41-201ENST00000384675 132 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 U3.22-201ENST00000391120 215 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS11Q9H270 PPIAP31-201ENST00000405422 495 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC096664.2-201ENST00000411843 406 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL513331.1-201ENST00000411908 397 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 RPL21P109-201ENST00000422213 475 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL158071.1-201ENST00000430315 461 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS11Q9H270 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS11Q9H270 RNU7-170P-201ENST00000459303 61 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS11Q9H270 HMGB1P35-201ENST00000503360 598 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 RBBP4P6-201ENST00000508098 202 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS11Q9H270 IGKV2-23-201ENST00000518729 323 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS11Q9H270 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.96□□□□□ -1.78
VPS11Q9H270 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.96□□□□□ -1.78
VPS11Q9H270 AC130289.1-201ENST00000577321 73 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC012433.1-201ENST00000588916 398 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL670379.6-201ENST00000603753 252 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC009779.6-201ENST00000603972 165 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC008162.1-201ENST00000604718 254 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL670379.1-201ENST00000604752 252 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL670379.5-201ENST00000605253 252 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL670379.8-201ENST00000605353 252 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AL670379.7-201ENST00000605823 252 ntBASIC3.96□□□□□ -1.78
VPS11Q9H270 AC090132.2-201ENST00000615881 347 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms