Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 RPL31P61-201ENST00000496160 376 ntBASIC5.82□□□□□ -1.48
NBPF3Q9H094 NDUFA5P6-201ENST00000542110 379 ntBASIC5.82□□□□□ -1.48
NBPF3Q9H094 DEFB117-201ENST00000602356 141 ntBASIC5.82□□□□□ -1.48
NBPF3Q9H094 AL355812.1-201ENST00000603215 216 ntBASIC5.82□□□□□ -1.48
NBPF3Q9H094 AC048347.1-201ENST00000624621 427 ntBASIC5.82□□□□□ -1.48
NBPF3Q9H094 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
NBPF3Q9H094 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NBPF3Q9H094 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.82□□□□□ -1.48
NBPF3Q9H094 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
NBPF3Q9H094 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
NBPF3Q9H094 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.82□□□□□ -1.48
NBPF3Q9H094 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NBPF3Q9H094 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NBPF3Q9H094 MUC2-202ENST00000613187 4845 ntBASIC5.82□□□□□ -1.48
NBPF3Q9H094 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 RNU6-235P-201ENST00000362644 107 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 RNA5SP332-201ENST00000391063 115 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 RPS26P47-201ENST00000427219 348 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 BX276092.4-201ENST00000452056 248 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 AC073073.1-201ENST00000493920 463 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 AL391358.1-201ENST00000605342 190 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 AC107294.1-201ENST00000609524 467 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 AL357075.2-201ENST00000614906 189 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 MIR3914-2-201ENST00000637339 95 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 AF127577.6-201ENST00000623352 2191 ntBASIC5.81□□□□□ -1.48
NBPF3Q9H094 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
NBPF3Q9H094 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
NBPF3Q9H094 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NBPF3Q9H094 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NBPF3Q9H094 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.8□□□□□ -1.48
NBPF3Q9H094 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NBPF3Q9H094 RNY1P11-201ENST00000363759 113 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 snoU2_19.4-201ENST00000364329 80 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 RNU6-1180P-201ENST00000364935 107 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 SNORA72.2-201ENST00000365028 127 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 Y_RNA.388-201ENST00000383919 113 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 RPL35AP21-201ENST00000437667 333 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 RNU6-1095P-201ENST00000516148 108 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.8□□□□□ -1.48
NBPF3Q9H094 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.8□□□□□ -1.48
NBPF3Q9H094 AC006349.1-201ENST00000555526 235 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.8□□□□□ -1.48
NBPF3Q9H094 AC024153.1-201ENST00000603103 365 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 AP002826.1-201ENST00000608835 315 ntBASIC5.8□□□□□ -1.48
NBPF3Q9H094 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
NBPF3Q9H094 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NBPF3Q9H094 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NBPF3Q9H094 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 AC008555.8-201ENST00000623602 2168 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NBPF3Q9H094 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 MIR450A1-201ENST00000362262 91 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-103P-201ENST00000363686 107 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNA5SP479-201ENST00000364858 117 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 Y_RNA.319-201ENST00000365138 92 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-1286P-201ENST00000383871 107 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-32P-201ENST00000383948 107 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-13P-201ENST00000384248 107 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-12P-201ENST00000384604 107 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-41P-201ENST00000384741 107 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 SNORA40.5-201ENST00000391061 128 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 U3.30-201ENST00000391308 210 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNA5SP113-201ENST00000410486 84 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 AC104333.2-201ENST00000422630 192 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 RNU6-537P-201ENST00000517277 103 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 AC109810.1-201ENST00000534066 224 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 AL590392.1-201ENST00000604960 446 ntBASIC5.79□□□□□ -1.48
NBPF3Q9H094 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NBPF3Q9H094 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
NBPF3Q9H094 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.79□□□□□ -1.48
NBPF3Q9H094 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NBPF3Q9H094 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NBPF3Q9H094 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.78□□□□□ -1.48
NBPF3Q9H094 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
NBPF3Q9H094 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
NBPF3Q9H094 SNORA25.7-201ENST00000364375 127 ntBASIC5.78□□□□□ -1.48
NBPF3Q9H094 RNU5E-7P-201ENST00000365290 117 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms