Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU1-92P-201ENST00000517017 135 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AP005639.2-201ENST00000527592 928 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AC015720.1-201ENST00000565251 277 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 ROCK1P1-201ENST00000573767 549 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AC243960.4-201ENST00000600532 288 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AC136443.5-201ENST00000603741 370 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 MTCYBP22-201ENST00000603788 447 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 AL157834.3-201ENST00000615543 103 ntBASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
UPF3BQ9BZI7 U8.3-201ENST00000363321 132 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 RNU6-207P-201ENST00000384137 107 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 SNORA67.6-201ENST00000391093 99 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 MTCO1P3-201ENST00000429327 192 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AL441985.1-201ENST00000457727 251 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AC021382.1-201ENST00000483523 359 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AC022880.1-201ENST00000534017 973 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AC079148.1-201ENST00000565944 819 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 BNIP3P23-201ENST00000599655 511 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AL078605.1-201ENST00000603529 500 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 AC009237.15-201ENST00000610252 501 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 ZNF209P-201ENST00000593450 2304 ntBASIC1.74□□□□□ -2.13
UPF3BQ9BZI7 RNA5SP276-201ENST00000362580 94 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 RNA5SP325-201ENST00000363756 130 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 RNU6-468P-201ENST00000384003 109 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 RNU6-997P-201ENST00000384725 107 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 MIR561-201ENST00000385216 97 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 USP9YP26-201ENST00000421008 661 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC097463.2-201ENST00000421074 142 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 MTND2P29-201ENST00000438595 412 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AL161788.1-201ENST00000441805 169 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC096745.1-201ENST00000509945 370 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 MIR449C-201ENST00000516047 92 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 Y_RNA.675-201ENST00000516389 149 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 SNORA48.11-201ENST00000517015 89 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC107953.1-201ENST00000522216 297 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 MTCYBP23-201ENST00000558717 1102 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC233702.2-202ENST00000562547 291 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC122134.1-202ENST00000569111 1201 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 MIR3167-201ENST00000579623 85 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 UBE2L4-201ENST00000587688 464 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC026741.1-201ENST00000605892 482 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 MIR6779-201ENST00000617283 64 ntBASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
UPF3BQ9BZI7 AP000648.3-201ENST00000623539 4507 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 RNU6-97P-201ENST00000363387 104 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 U3.13-201ENST00000364804 214 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 SNORD114-22-201ENST00000365423 72 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 RN7SKP51-201ENST00000410781 304 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 AL353621.1-201ENST00000418219 243 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 MTCO1P53-201ENST00000441633 699 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 AC008628.1-201ENST00000508663 265 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 MTCYBP16-201ENST00000509187 1129 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 MTND5P13-201ENST00000513046 1079 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 SLC2A13P1-201ENST00000531560 322 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 MTCO2P15-201ENST00000532655 656 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 AL031274.2-201ENST00000599419 203 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 MIR6515-201ENST00000619843 57 ntBASIC1.72□□□□□ -2.13
UPF3BQ9BZI7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 RNU5B-1-201ENST00000363286 116 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 SNORA8-201ENST00000384574 139 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 RSL24D1P8-201ENST00000434442 492 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AC020550.1-201ENST00000447385 163 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 CECR9-201ENST00000453421 199 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AP001324.2-201ENST00000461163 319 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 FO393415.2-201ENST00000480085 343 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 RNA5SP165-201ENST00000517142 115 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AC079598.5-201ENST00000547460 117 ntBASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.71□□□□□ -2.14
UPF3BQ9BZI7 ARL2BPP2-201ENST00000550907 489 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms