Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORA17.3-201ENST00000391159 129 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 SUMO2P12-201ENST00000405924 140 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 ISCA1P1-201ENST00000426679 387 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC104651.1-201ENST00000427559 735 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 TIMM9P1-201ENST00000436122 256 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC003989.2-201ENST00000440224 169 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 FABP5P15-201ENST00000453566 214 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 RPL37P6-201ENST00000460682 294 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC034244.1-201ENST00000507687 207 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC022447.1-201ENST00000515358 464 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 MRPS36P5-201ENST00000551909 298 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 MIR3683-201ENST00000580847 82 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 MIR4307-201ENST00000582802 84 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC105148.1-201ENST00000604961 409 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC090970.3-201ENST00000612566 866 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AC004520.1-201ENST00000608362 1413 ntBASIC2.3□□□□□ -2.04
RPAP1Q9BWH6 AL109809.4-201ENST00000603520 2185 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 SNORD113-6-201ENST00000363345 75 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 RNU6-701P-201ENST00000384059 107 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 RNU6-443P-201ENST00000384780 107 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 MIR9-3-201ENST00000385084 90 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL021407.1-201ENST00000404531 386 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 RPL26P27-201ENST00000414397 437 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 ZNF90P2-204ENST00000419323 1075 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 HMGB1P27-201ENST00000431429 603 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 RPL36AP53-201ENST00000432891 316 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL139109.1-201ENST00000455491 297 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 RPS29P11-201ENST00000496507 171 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC107393.1-201ENST00000512403 346 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AP006587.4-201ENST00000526053 529 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 MTATP6P15-201ENST00000527233 835 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC023050.2-201ENST00000544968 387 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC021739.1-201ENST00000559631 174 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC090888.2-201ENST00000559765 1144 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 MIR3616-201ENST00000584070 92 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC005261.5-201ENST00000596280 355 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC112187.2-201ENST00000604345 283 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC107952.2-201ENST00000606048 486 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC135507.1-201ENST00000607214 561 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC092953.2-201ENST00000608000 699 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL589743.7-201ENST00000612637 233 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AC091834.1-201ENST00000614543 472 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 DUXAP9-208ENST00000622815 614 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL137003.2-201ENST00000606924 2538 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 AL359851.1-201ENST00000569460 4997 ntBASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RPAP1Q9BWH6 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 RNY4P24-201ENST00000362735 96 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 NDUFS5P1-201ENST00000405668 289 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 RNU4-72P-201ENST00000410754 173 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 OR6C5P-201ENST00000452388 923 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 MTCO1P42-201ENST00000457379 726 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC007182.2-201ENST00000489251 402 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC022493.1-201ENST00000492984 337 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 MIR514B-201ENST00000516774 80 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 RNU6-703P-201ENST00000516946 107 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 MTND2P32-201ENST00000521584 1038 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 OR5AQ1P-201ENST00000527596 927 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 RPS15AP11-201ENST00000594193 385 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC011458.1-201ENST00000604034 617 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC107214.2-201ENST00000608204 634 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC025594.3-201ENST00000613068 790 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AL031667.3-201ENST00000620124 655 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 AC010329.5-201ENST00000623497 2174 ntBASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RPAP1Q9BWH6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms