Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 OR6C66P-201ENST00000414917 930 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 Z85995.1-201ENST00000415547 335 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 ATG3P1-201ENST00000419507 911 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AL645937.1-202ENST00000421799 937 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.1□□□□□ -1.91
PKP4Q99569 AL512844.2-201ENST00000433990 593 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 MRPL50P4-201ENST00000446432 475 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP4Q99569 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP4Q99569 RPS29P12-201ENST00000460178 152 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 RN7SL601P-201ENST00000471221 293 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 RPL21P99-201ENST00000480369 423 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC103851.1-201ENST00000506833 274 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP4Q99569 AC112206.3-201ENST00000514578 389 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 RNU1-143P-201ENST00000516296 146 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 SNORA31.21-201ENST00000517180 77 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 SNORA31.26-201ENST00000517250 137 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP4Q99569 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP4Q99569 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.1□□□□□ -1.91
PKP4Q99569 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.1□□□□□ -1.91
PKP4Q99569 AC005668.1-201ENST00000571142 476 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC135507.2-201ENST00000612443 309 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 uc_338.25-201ENST00000613756 156 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AL442067.2-201ENST00000614033 363 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 TUG1_2.1-201ENST00000614234 87 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 SNHG22-203ENST00000617833 660 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC090574.1-201ENST00000623186 233 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC025034.2-201ENST00000623264 286 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 TPTEP1-208ENST00000636884 213 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP4Q99569 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PKP4Q99569 MTND5P1-201ENST00000445440 1375 ntBASIC3.1□□□□□ -1.91
PKP4Q99569 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.1□□□□□ -1.91
PKP4Q99569 RNU6-188P-201ENST00000364207 107 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RNU4-66P-201ENST00000365199 138 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RNU6-38P-201ENST00000384085 107 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RNU6-198P-201ENST00000384258 104 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL356057.2-201ENST00000403318 432 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RPL5P18-201ENST00000406671 891 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 Y_RNA.615-201ENST00000410769 117 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 HMGN2P30-201ENST00000423237 256 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RPL23AP83-201ENST00000434984 473 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 MTCO3P45-201ENST00000443036 613 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL162389.1-201ENST00000449233 177 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL118520.1-201ENST00000450770 291 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RNU6-333P-201ENST00000459117 107 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC008481.1-201ENST00000463278 396 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL135752.1-201ENST00000479477 471 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RN7SL432P-201ENST00000484057 298 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 HMGN1P13-201ENST00000505795 138 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 TTC39CP1-201ENST00000512513 755 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 SNORA19.2-201ENST00000516013 114 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RN7SKP256-201ENST00000517201 314 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PKP4Q99569 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP4Q99569 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP4Q99569 AL355836.1-201ENST00000555951 870 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 ANP32BP3-201ENST00000559213 706 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
PKP4Q99569 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.09□□□□□ -1.91
PKP4Q99569 MIR5680-201ENST00000577577 84 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC024619.4-201ENST00000580924 316 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 MIR4742-201ENST00000581069 85 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 MIR4424-201ENST00000585257 86 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.6-201ENST00000603753 252 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.11-201ENST00000604059 253 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC008162.1-201ENST00000604718 254 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.1-201ENST00000604752 252 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.5-201ENST00000605253 252 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.12-201ENST00000605291 253 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.8-201ENST00000605353 252 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AL670379.7-201ENST00000605823 252 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 RMST_7.1-201ENST00000621935 268 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC011155.2-201ENST00000623202 216 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 AC090617.7-201ENST00000623952 126 ntBASIC3.09□□□□□ -1.91
PKP4Q99569 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.09□□□□□ -1.91
PKP4Q99569 MTND4P14-201ENST00000435799 1354 ntBASIC3.09□□□□□ -1.92
PKP4Q99569 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.09□□□□□ -1.92
PKP4Q99569 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
PKP4Q99569 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PKP4Q99569 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PKP4Q99569 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
PKP4Q99569 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKP4Q99569 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PKP4Q99569 RNA5SP383-201ENST00000362934 120 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 SNORD115-7-201ENST00000365306 82 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 RNU6-805P-201ENST00000365643 106 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
PKP4Q99569 SNORA24.1-201ENST00000384401 135 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 U3.19-201ENST00000390893 196 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 TXNP7-201ENST00000406296 293 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 AC114491.1-201ENST00000416095 246 ntBASIC3.08□□□□□ -1.92
PKP4Q99569 ARL5AP1-201ENST00000418991 388 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms