Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL512643.1-201ENST00000635735 524 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 AL133383.2-201ENST00000622958 2336 ntBASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDK5RAP1Q96SZ6 PABPC1P7-201ENST00000413177 1513 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 GABPAP-201ENST00000419271 1356 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR423-201ENST00000362201 94 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.19-201ENST00000362462 99 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-200P-201ENST00000364743 107 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.399-201ENST00000383955 105 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR517A-201ENST00000385001 87 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 HLFP1-201ENST00000402375 499 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU2-33P-201ENST00000410344 192 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU2-21P-201ENST00000410368 188 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 UBE2FP1-201ENST00000416536 447 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 SDAD1P3-201ENST00000427380 333 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL36AP6-201ENST00000435770 321 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AL031274.1-201ENST00000450334 232 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC084198.1-201ENST00000477747 402 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL21P129-201ENST00000491732 478 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 UBE2CP3-201ENST00000502715 450 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC022695.1-201ENST00000522089 237 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC104576.1-201ENST00000524225 88 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 DEFB108D-201ENST00000527787 222 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC090877.1-201ENST00000561418 344 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AL138889.2-201ENST00000603883 242 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 ELOCP5-201ENST00000604924 333 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC012531.5-201ENST00000611375 151 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR4496-201ENST00000635896 61 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 AC103710.2-202ENST00000641454 2853 ntBASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.95□□□□□ -1.78
CDK5RAP1Q96SZ6 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AP001486.2-201ENST00000561652 5113 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU4-42P-201ENST00000364738 142 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORD6-201ENST00000365444 73 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-338P-201ENST00000383888 105 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 MIR200C-201ENST00000384980 68 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORD73A-201ENST00000386062 65 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 RNA5SP424-201ENST00000390988 115 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 Z98941.1-201ENST00000407764 100 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU6-516P-201ENST00000411381 104 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL21P38-201ENST00000418090 167 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 EZH2P1-201ENST00000431167 291 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC073910.1-201ENST00000445047 438 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AL500522.2-201ENST00000448562 343 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORD97-201ENST00000459187 142 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC026801.1-201ENST00000497178 464 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC005921.1-201ENST00000510589 286 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA25.11-201ENST00000515935 105 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 OR5D17P-201ENST00000531492 978 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC104763.2-201ENST00000604179 382 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 AC002044.1-201ENST00000606707 158 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 CR392039.5-201ENST00000623201 510 ntBASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
CDK5RAP1Q96SZ6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.539-201ENST00000384635 107 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA41-201ENST00000384675 132 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA11-201ENST00000408789 128 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 RNU2-37P-201ENST00000410695 177 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AP000275.1-201ENST00000411943 390 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 RPL21P24-201ENST00000413752 448 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MTCO3P19-201ENST00000415864 321 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AC099799.1-201ENST00000439809 192 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AL359672.1-201ENST00000442302 409 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 SNORA84-201ENST00000459229 133 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AC098869.1-201ENST00000481627 292 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.93□□□□□ -1.78
CDK5RAP1Q96SZ6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms