Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU2-33P-201ENST00000410344 192 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 MTND4P19-201ENST00000446659 478 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 Y_RNA.653-201ENST00000459091 95 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 Y_RNA.631-201ENST00000459607 101 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 RAC1P2-201ENST00000511164 579 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC087854.1-201ENST00000519706 414 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 MIR1273C-201ENST00000578669 77 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 MIR5690-201ENST00000583739 73 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 AL360085.1-201ENST00000604713 532 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 SNORA62.6-201ENST00000606322 83 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 AC107294.3-201ENST00000609211 526 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 ATP5A1P2-202ENST00000616464 443 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 AL031601.2-202ENST00000622650 282 ntBASIC3.38□□□□□ -1.87
SNX18Q96RF0 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SNX18Q96RF0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SNX18Q96RF0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SNX18Q96RF0 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 DEFB109C-201ENST00000382575 264 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 DEFB109B-201ENST00000382656 264 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 Y_RNA.445-201ENST00000384168 102 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 RNU6-1179P-201ENST00000384667 107 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 MIR200C-201ENST00000384980 68 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 RNA5SP424-201ENST00000390988 115 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 MTND2P23-201ENST00000422990 651 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 Z82205.1-201ENST00000428456 297 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 SNORA71B-202ENST00000439232 272 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AL359672.1-201ENST00000442302 409 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 MTCO3P10-201ENST00000455912 772 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC079140.5-201ENST00000507882 310 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 ELOCP31-201ENST00000540463 467 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AC026371.1-201ENST00000551867 419 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AL157871.3-201ENST00000557231 293 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 SNRPGP17-201ENST00000603780 214 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 AL354798.1-201ENST00000622505 329 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 CR392039.5-201ENST00000623201 510 ntBASIC3.37□□□□□ -1.87
SNX18Q96RF0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.37□□□□□ -1.87
SNX18Q96RF0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX18Q96RF0 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SNX18Q96RF0 AL133383.2-201ENST00000622958 2336 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 Y_RNA.187-201ENST00000363918 113 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RNU6-213P-201ENST00000384051 104 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 Y_RNA.473-201ENST00000384333 102 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RNU6-95P-201ENST00000384697 107 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RNA5SP171-201ENST00000391071 115 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RNU2-37P-201ENST00000410695 177 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 AC245054.2-201ENST00000415639 319 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
SNX18Q96RF0 AL158156.1-201ENST00000422509 473 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 HMGB1P9-201ENST00000429856 646 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 GOT2P5-201ENST00000433995 546 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 BX679664.1-201ENST00000434429 253 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RPL23AP22-201ENST00000437556 453 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 NIPA2P5-201ENST00000452282 464 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 FABP5P15-201ENST00000453566 214 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RPL21P104-201ENST00000464143 478 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 AC022493.1-201ENST00000492984 337 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 MTCYBP40-201ENST00000509390 1135 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 RNU6-1016P-201ENST00000516689 94 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 TRAV28-201ENST00000557548 323 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
SNX18Q96RF0 KLKP1-201ENST00000595979 403 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 NUTF2P8-201ENST00000604593 363 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 AC040896.1-201ENST00000613819 479 ntBASIC3.36□□□□□ -1.87
SNX18Q96RF0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms