Protein–RNA interactions for Protein: Q96QS3

ARX, Homeobox protein ARX, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARXQ96QS3 RNU1-83P-201ENST00000363426 164 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 Y_RNA.428-201ENST00000384078 102 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 MIR548F4-201ENST00000408515 105 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 AC098614.2-201ENST00000426040 255 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.69□□□□□ -1.5
ARXQ96QS3 CYCSP32-201ENST00000440548 321 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.69□□□□□ -1.5
ARXQ96QS3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC5.69□□□□□ -1.5
ARXQ96QS3 AC117503.1-201ENST00000472241 394 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 AL592156.1-201ENST00000508758 304 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.69□□□□□ -1.5
ARXQ96QS3 RNU6-470P-201ENST00000515954 104 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 RNU6-572P-201ENST00000516724 80 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.69□□□□□ -1.5
ARXQ96QS3 AC007792.1-201ENST00000623023 402 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC5.69□□□□□ -1.5
ARXQ96QS3 UBE3AP2-201ENST00000429033 2259 ntBASIC5.69□□□□□ -1.5
ARXQ96QS3 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
ARXQ96QS3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.68□□□□□ -1.5
ARXQ96QS3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ARXQ96QS3 RNU6-778P-201ENST00000363269 103 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 RNU6-45P-201ENST00000384471 107 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 RNU4-6P-201ENST00000410804 122 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC5.68□□□□□ -1.5
ARXQ96QS3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.68□□□□□ -1.5
ARXQ96QS3 AL500522.2-201ENST00000448562 343 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.68□□□□□ -1.5
ARXQ96QS3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC5.68□□□□□ -1.5
ARXQ96QS3 Y_RNA.670-201ENST00000516255 105 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 SNORD116.3-201ENST00000517176 78 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 SNORA70.24-201ENST00000517233 118 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 GNAI2P1-201ENST00000541815 315 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 AL161670.1-201ENST00000554348 137 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC5.68□□□□□ -1.5
ARXQ96QS3 AC096577.2-201ENST00000611455 153 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 uc_338.13-201ENST00000618243 179 ntBASIC5.68□□□□□ -1.5
ARXQ96QS3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.68□□□□□ -1.5
ARXQ96QS3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ARXQ96QS3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ARXQ96QS3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ARXQ96QS3 ADAM3A-203ENST00000461344 2157 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ARXQ96QS3 AL158163.1-201ENST00000603915 1649 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ARXQ96QS3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ARXQ96QS3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ARXQ96QS3 MIR195-201ENST00000385194 87 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ARXQ96QS3 SAR1AP2-201ENST00000392696 594 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 HDGFP1-201ENST00000405943 252 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.67□□□□□ -1.5
ARXQ96QS3 AL590632.1-201ENST00000424289 371 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 UBE2V1P4-201ENST00000425374 344 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.67□□□□□ -1.5
ARXQ96QS3 TOMM20P4-201ENST00000427861 435 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AC096644.2-201ENST00000429278 159 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AL645568.3-201ENST00000433683 316 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 RPL23AP50-201ENST00000434149 455 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.67□□□□□ -1.5
ARXQ96QS3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.67□□□□□ -1.5
ARXQ96QS3 AL078601.1-201ENST00000444542 271 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 DHFRP3-201ENST00000455595 559 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 RPL21P41-201ENST00000459863 264 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 SNORA31.19-201ENST00000517079 126 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.67□□□□□ -1.5
ARXQ96QS3 AC025423.5-201ENST00000550230 219 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC5.67□□□□□ -1.5
ARXQ96QS3 AC007485.1-201ENST00000616755 206 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AC012314.7-201ENST00000619693 93 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 HSPA8P4-201ENST00000511877 1920 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
ARXQ96QS3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ARXQ96QS3 AC008669.1-201ENST00000565823 2178 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 AC110491.1-201ENST00000562191 2010 ntBASIC5.67□□□□□ -1.5
ARXQ96QS3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ARXQ96QS3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
ARXQ96QS3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.66□□□□□ -1.5
ARXQ96QS3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
ARXQ96QS3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ARXQ96QS3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ARXQ96QS3 RNU6-702P-201ENST00000364982 107 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 RNU6-95P-201ENST00000384697 107 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
ARXQ96QS3 RPL21P65-201ENST00000406094 466 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.66□□□□□ -1.5
ARXQ96QS3 RPL7P37-201ENST00000425095 738 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 AL731563.1-201ENST00000442202 214 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 RPS29P20-201ENST00000489592 171 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 HMGB1P30-201ENST00000492455 606 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.66□□□□□ -1.5
ARXQ96QS3 AC008958.1-201ENST00000511047 682 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.66□□□□□ -1.5
ARXQ96QS3 AC107294.3-201ENST00000609211 526 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 AC007546.2-201ENST00000623996 360 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
ARXQ96QS3 U2.21-201ENST00000637295 81 ntBASIC5.66□□□□□ -1.5
ARXQ96QS3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
ARXQ96QS3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.66□□□□□ -1.5
ARXQ96QS3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.66□□□□□ -1.5
ARXQ96QS3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms