Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
FGD4Q96M96 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FGD4Q96M96 Y_RNA.428-201ENST00000384078 102 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 RNU6-1025P-201ENST00000410629 104 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 MTCYBP10-201ENST00000424905 650 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.34□□□□□ -1.71
FGD4Q96M96 AL133396.1-201ENST00000432048 687 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 RPS6P12-201ENST00000432491 726 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.34□□□□□ -1.71
FGD4Q96M96 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC4.34□□□□□ -1.71
FGD4Q96M96 FTH1P25-201ENST00000447665 469 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 S100A11P1-201ENST00000477525 312 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.34□□□□□ -1.71
FGD4Q96M96 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.34□□□□□ -1.71
FGD4Q96M96 HMGN1P11-201ENST00000508668 303 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 AC110768.1-201ENST00000509222 400 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 RNU6-264P-201ENST00000517134 104 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 SNORD116.3-201ENST00000517176 78 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 GNAI2P1-201ENST00000541815 315 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.34□□□□□ -1.71
FGD4Q96M96 SRGNP1-201ENST00000603392 451 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 AP000787.2-201ENST00000604432 568 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 AC019176.2-201ENST00000611579 315 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 AC010205.1-201ENST00000616668 449 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.34□□□□□ -1.71
FGD4Q96M96 AC119674.1-207ENST00000641355 633 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
FGD4Q96M96 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.34□□□□□ -1.71
FGD4Q96M96 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
FGD4Q96M96 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FGD4Q96M96 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
FGD4Q96M96 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.72
FGD4Q96M96 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.34□□□□□ -1.72
FGD4Q96M96 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
FGD4Q96M96 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
FGD4Q96M96 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
FGD4Q96M96 ZNF962P-201ENST00000443465 3140 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 Y_RNA.245-201ENST00000364493 95 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 RNU2-33P-201ENST00000410344 192 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 RNU6-174P-201ENST00000410406 106 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 Y_RNA.605-201ENST00000410577 105 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 AL096701.2-201ENST00000416920 238 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FGD4Q96M96 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FGD4Q96M96 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.33□□□□□ -1.72
FGD4Q96M96 MTCYBP9-201ENST00000431021 303 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 GSTA11P-201ENST00000452866 669 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FGD4Q96M96 RPL12P25-201ENST00000455592 494 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 RPL21P13-201ENST00000488305 481 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.33□□□□□ -1.72
FGD4Q96M96 RAC1P2-201ENST00000511164 579 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.33□□□□□ -1.72
FGD4Q96M96 MTCO2P24-201ENST00000515611 426 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 Vault.1-201ENST00000516474 102 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.33□□□□□ -1.72
FGD4Q96M96 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.33□□□□□ -1.72
FGD4Q96M96 SUB1P3-201ENST00000564581 315 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.33□□□□□ -1.72
FGD4Q96M96 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.33□□□□□ -1.72
FGD4Q96M96 AL162373.1-201ENST00000620433 407 ntBASIC4.33□□□□□ -1.72
FGD4Q96M96 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
FGD4Q96M96 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.32□□□□□ -1.72
FGD4Q96M96 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.32□□□□□ -1.72
FGD4Q96M96 RNU6-384P-201ENST00000364900 104 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 RNU6-741P-201ENST00000383889 107 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 MIR3074-201ENST00000384885 81 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.32□□□□□ -1.72
FGD4Q96M96 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.32□□□□□ -1.72
FGD4Q96M96 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.32□□□□□ -1.72
FGD4Q96M96 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.32□□□□□ -1.72
FGD4Q96M96 AC099799.1-201ENST00000439809 192 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.32□□□□□ -1.72
FGD4Q96M96 HMGB3P30-201ENST00000457863 606 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC008571.1-201ENST00000467232 300 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC128713.1-201ENST00000471495 306 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC068781.1-201ENST00000488231 618 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC018437.1-201ENST00000492214 406 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC078817.1-201ENST00000492623 435 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.32□□□□□ -1.72
FGD4Q96M96 RNU6-475P-201ENST00000516073 104 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 SNORA70.16-201ENST00000516390 95 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC109446.1-201ENST00000566172 220 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC084757.4-201ENST00000616350 526 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 AC087588.2-201ENST00000617667 426 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.32□□□□□ -1.72
FGD4Q96M96 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.32□□□□□ -1.72
FGD4Q96M96 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 AL359693.1-201ENST00000614959 2407 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.32□□□□□ -1.72
FGD4Q96M96 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
FGD4Q96M96 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms