Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 ELOCP7-201ENST00000439968 331 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 USP9YP15-201ENST00000442391 422 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AL033528.1-201ENST00000453780 140 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC013267.1-201ENST00000458227 267 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC007182.2-201ENST00000489251 402 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC114786.4-201ENST00000508771 728 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 RN7SKP24-201ENST00000515888 284 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 RNU6-1092P-201ENST00000516955 87 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC009902.1-201ENST00000519351 183 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AP002963.1-201ENST00000530590 184 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AP002453.2-201ENST00000533503 320 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.82□□□□□ -2.12
LINC00477Q96M19 MIR3611-201ENST00000584484 83 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 ATP1B3P1-201ENST00000605365 821 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 FTX_3.1-201ENST00000610451 147 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AL133173.2-201ENST00000614270 90 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AP001506.1-201ENST00000615444 211 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 AC099842.1-201ENST00000619919 596 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 U2.21-201ENST00000637295 81 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.82□□□□□ -2.12
LINC00477Q96M19 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
LINC00477Q96M19 AL596028.1-201ENST00000326971 197 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 MIRLET7G-201ENST00000362280 84 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 SNORD3E-201ENST00000362899 217 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 Y_RNA.159-201ENST00000363674 87 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU6-7-201ENST00000364784 107 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU6-8-201ENST00000365467 107 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 Z98749.2-208ENST00000381646 500 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU6-741P-201ENST00000383889 107 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 SNORA20.2-201ENST00000383922 131 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU6-1119P-201ENST00000384349 108 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 SNORA24.1-201ENST00000384401 135 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 Y_RNA.534-201ENST00000384599 112 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 SNORD23.1-201ENST00000408212 104 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 CDK8P2-201ENST00000415020 547 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 C1DP2-201ENST00000418167 426 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 ELOCP4-201ENST00000420090 333 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 COTL1P1-201ENST00000422309 375 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RAC1P6-201ENST00000423911 575 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 ISCA1P1-201ENST00000426679 387 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 C8orf59P1-201ENST00000429930 303 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 AC000111.3-201ENST00000433478 193 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 KATNBL1P3-201ENST00000443475 909 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 AC138853.1-201ENST00000503549 823 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU5F-8P-201ENST00000515941 111 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNU6-430P-201ENST00000517078 107 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 RNA5SP165-201ENST00000517142 115 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 AP005902.1-201ENST00000521358 186 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 AP000889.2-201ENST00000532684 490 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 AL359212.1-201ENST00000556608 614 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 GTF3AP2-201ENST00000557014 266 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 AC137800.2-201ENST00000574375 120 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 AC067747.1-201ENST00000608026 250 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 PISRT1-201ENST00000626175 531 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 Z99571.1-201ENST00000636677 394 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 MTND5P42-201ENST00000637720 498 ntBASIC1.81□□□□□ -2.12
LINC00477Q96M19 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LINC00477Q96M19 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
LINC00477Q96M19 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
LINC00477Q96M19 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 HSPA8P4-201ENST00000511877 1920 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.8□□□□□ -2.12
LINC00477Q96M19 RNU6-778P-201ENST00000363269 103 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 RNU4-91P-201ENST00000364778 135 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 Y_RNA.367-201ENST00000365544 101 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 Y_RNA.436-201ENST00000384097 102 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 RNU6-74P-201ENST00000384235 107 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 RNU6-606P-201ENST00000384721 111 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 MIR558-201ENST00000384920 94 ntBASIC1.8□□□□□ -2.12
LINC00477Q96M19 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms